Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm46997-201ENSMUST00000222108 217 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm4987-201ENSMUST00000078326 408 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm23055-201ENSMUST00000082805 94 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm22974-201ENSMUST00000083301 103 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm15215-201ENSMUST00000117773 489 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm14694-201ENSMUST00000121856 282 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm13725-201ENSMUST00000122139 207 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm25427-201ENSMUST00000157605 103 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm19898-201ENSMUST00000177490 251 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm27521-201ENSMUST00000184022 64 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Trbv11-201ENSMUST00000194354 260 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm43853-201ENSMUST00000197162 301 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm18540-201ENSMUST00000204025 526 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm44475-201ENSMUST00000204041 424 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Mir496a-201ENSMUST00000093627 79 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.86□□□□□ -1.63
Trim56Q80VI1 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim56Q80VI1 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm13478-201ENSMUST00000118312 413 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm13876-201ENSMUST00000118451 261 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm14627-201ENSMUST00000118931 567 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm24909-201ENSMUST00000157290 280 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm22598-201ENSMUST00000157600 127 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm23557-201ENSMUST00000157820 138 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm42451-201ENSMUST00000197410 244 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm44274-201ENSMUST00000203417 256 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm44446-201ENSMUST00000204864 255 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Trim56Q80VI1 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.85□□□□□ -1.63
Trim56Q80VI1 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim56Q80VI1 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm22269-201ENSMUST00000104002 130 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm14714-201ENSMUST00000119743 439 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm13852-201ENSMUST00000122350 242 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm22986-201ENSMUST00000122753 130 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm25428-201ENSMUST00000157608 114 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm24858-201ENSMUST00000158058 323 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm22389-201ENSMUST00000158193 301 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm26362-201ENSMUST00000158865 315 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm5372-201ENSMUST00000187540 409 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm28288-201ENSMUST00000191019 214 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm7871-201ENSMUST00000195346 618 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm29774-201ENSMUST00000219270 436 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm46998-201ENSMUST00000221444 330 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.84□□□□□ -1.63
Trim56Q80VI1 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms