Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm28404-201ENSMUST00000190242 453 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Mir7116-201ENSMUST00000195956 70 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm19089-201ENSMUST00000197207 613 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm44125-201ENSMUST00000203068 448 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm7039-201ENSMUST00000205138 346 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm2446-201ENSMUST00000220144 772 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.73□□□□□ -1.81
CtcfQ61164 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm23506-201ENSMUST00000083077 107 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
CtcfQ61164 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CtcfQ61164 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CtcfQ61164 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CtcfQ61164 Mir883a-201ENSMUST00000104824 76 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm14518-201ENSMUST00000117351 542 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm13167-201ENSMUST00000118554 578 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm13239-201ENSMUST00000119920 637 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm11829-201ENSMUST00000121003 282 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm14678-201ENSMUST00000121396 482 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm24635-201ENSMUST00000122712 128 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.72□□□□□ -1.81
CtcfQ61164 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.72□□□□□ -1.81
CtcfQ61164 Gm23024-201ENSMUST00000158770 292 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm23473-201ENSMUST00000158883 116 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm19932-201ENSMUST00000177033 313 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm22584-201ENSMUST00000177935 92 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm26092-201ENSMUST00000179798 97 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Mir669a-1-201ENSMUST00000180238 97 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm28843-201ENSMUST00000189198 678 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm29546-201ENSMUST00000191171 678 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm43115-201ENSMUST00000196244 160 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm44654-201ENSMUST00000208052 329 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm45614-201ENSMUST00000209994 721 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm30674-201ENSMUST00000214523 392 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.72□□□□□ -1.81
CtcfQ61164 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CtcfQ61164 Gm22364-201ENSMUST00000083097 98 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Gm22154-201ENSMUST00000083844 131 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Snord15a-201ENSMUST00000083888 148 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CtcfQ61164 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CtcfQ61164 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.72□□□□□ -1.81
CtcfQ61164 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
CtcfQ61164 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.71□□□□□ -1.81
CtcfQ61164 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm14811-201ENSMUST00000117070 117 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm14159-201ENSMUST00000119832 451 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm14687-201ENSMUST00000120206 363 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm14392-201ENSMUST00000120332 401 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm9225-201ENSMUST00000121921 836 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm15899-201ENSMUST00000128586 238 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm24901-201ENSMUST00000158125 110 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm21815-201ENSMUST00000178213 664 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm22910-201ENSMUST00000178568 132 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Mir6541-201ENSMUST00000183649 110 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm44355-201ENSMUST00000200417 104 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm19649-201ENSMUST00000201126 822 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm43026-201ENSMUST00000202972 325 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm44294-201ENSMUST00000205090 728 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm3442-201ENSMUST00000216808 710 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.71□□□□□ -1.82
CtcfQ61164 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms