Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm16431-201ENSMUST00000117454 431 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm15176-201ENSMUST00000117734 135 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm12640-201ENSMUST00000120097 310 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm16533-201ENSMUST00000140035 228 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm22755-201ENSMUST00000157143 100 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm22651-201ENSMUST00000157872 94 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm20698-201ENSMUST00000175657 233 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Mir6372-201ENSMUST00000185114 109 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm6651-201ENSMUST00000189471 271 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm37037-201ENSMUST00000194475 424 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm18410-201ENSMUST00000207199 577 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm18268-201ENSMUST00000208445 943 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Gm18039-201ENSMUST00000217816 728 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Trav2Q5R1I9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.04□□□□□ -2.08
Trav2Q5R1I9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm11285-201ENSMUST00000118443 322 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm11556-201ENSMUST00000120751 288 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm14775-201ENSMUST00000122089 310 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm22534-201ENSMUST00000158173 104 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm29192-201ENSMUST00000190942 377 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm44088-201ENSMUST00000204595 237 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.03□□□□□ -2.08
Trav2Q5R1I9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav2Q5R1I9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
Trav2Q5R1I9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.09
Trav2Q5R1I9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav2Q5R1I9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm13806-201ENSMUST00000117822 325 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm23473-201ENSMUST00000158883 116 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm8292-201ENSMUST00000162574 396 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Mir3066-201ENSMUST00000175296 83 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm26960-201ENSMUST00000182263 412 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm7329-201ENSMUST00000185915 210 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm29335-201ENSMUST00000188361 459 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.02□□□□□ -2.09
Trav2Q5R1I9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm44519-201ENSMUST00000206486 122 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm45614-201ENSMUST00000209994 721 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm6796-201ENSMUST00000211919 243 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm9762-201ENSMUST00000036976 444 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Gm5471-201ENSMUST00000072732 337 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Trav2Q5R1I9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.02□□□□□ -2.09
Trav2Q5R1I9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm12513-201ENSMUST00000118617 352 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm12071-201ENSMUST00000121968 469 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm25321-201ENSMUST00000122558 102 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm24075-201ENSMUST00000158175 72 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm24773-201ENSMUST00000158513 99 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm16232-201ENSMUST00000162856 167 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm17064-201ENSMUST00000167690 452 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm19224-201ENSMUST00000190477 793 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm29389-201ENSMUST00000191562 352 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm43669-201ENSMUST00000198229 436 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm44060-201ENSMUST00000204440 410 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm44634-201ENSMUST00000206119 152 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm45173-201ENSMUST00000206819 305 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm45678-201ENSMUST00000210509 295 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Gm45696-201ENSMUST00000212088 985 ntBASIC2.01□□□□□ -2.09
Trav2Q5R1I9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms