Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm14007-201ENSMUST00000118288 210 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm14129-201ENSMUST00000122436 291 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm5958-201ENSMUST00000147698 297 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Mir3075-201ENSMUST00000175340 85 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm25194-201ENSMUST00000177987 79 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm21827-201ENSMUST00000178247 423 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm42924-201ENSMUST00000197261 185 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm43224-201ENSMUST00000201567 898 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm45023-201ENSMUST00000207951 379 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm46136-201ENSMUST00000214730 565 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm26494-201ENSMUST00000083154 143 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm24493-201ENSMUST00000083805 143 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trav6-2Q5R1I4 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm6574-201ENSMUST00000120037 362 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm26271-201ENSMUST00000158349 104 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm25902-201ENSMUST00000158493 318 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm3102-201ENSMUST00000164236 489 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm26177-201ENSMUST00000178683 107 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm21894-201ENSMUST00000179631 546 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm25873-201ENSMUST00000180317 107 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm28560-201ENSMUST00000186091 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm28334-201ENSMUST00000186653 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm28495-201ENSMUST00000188452 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm28232-201ENSMUST00000188683 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm28481-201ENSMUST00000189231 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm29059-201ENSMUST00000191534 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm19694-201ENSMUST00000192364 505 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37765-201ENSMUST00000192395 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37692-201ENSMUST00000192633 232 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37237-201ENSMUST00000192893 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37599-201ENSMUST00000193067 489 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm36968-201ENSMUST00000193737 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37007-201ENSMUST00000194234 319 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm38290-201ENSMUST00000195238 315 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm7675-201ENSMUST00000208828 686 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm23850-201ENSMUST00000083830 169 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm4017-201ENSMUST00000084813 338 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.35□□□□□ -2.03
Trav6-2Q5R1I4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm25563-201ENSMUST00000104603 74 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm11221-201ENSMUST00000117230 597 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm11490-201ENSMUST00000118128 272 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm13751-201ENSMUST00000120280 752 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm16218-201ENSMUST00000155424 388 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms