Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm27540-201ENSMUST00000184950 187 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm37801-201ENSMUST00000194754 274 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm43028-201ENSMUST00000202561 481 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm4045-201ENSMUST00000204076 310 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm45392-201ENSMUST00000210441 214 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm9616-201ENSMUST00000221154 781 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm24611-201ENSMUST00000083272 107 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.62□□□□□ -1.67
Rnf43Q5NCP0 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm23142-201ENSMUST00000101848 105 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm26240-201ENSMUST00000101893 105 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm13153-201ENSMUST00000120969 637 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm14500-201ENSMUST00000121647 113 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm28304-201ENSMUST00000185977 312 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm29256-201ENSMUST00000189094 312 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm28484-201ENSMUST00000190606 312 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm8069-201ENSMUST00000197887 154 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm44208-201ENSMUST00000205199 421 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm35857-201ENSMUST00000212739 178 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Mir383-201ENSMUST00000083523 70 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf43Q5NCP0 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Mir701-201ENSMUST00000102208 109 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm23705-201ENSMUST00000104370 130 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm13876-201ENSMUST00000118451 261 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm11935-201ENSMUST00000118608 399 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm13396-201ENSMUST00000120617 271 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm5379-201ENSMUST00000120973 826 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm14841-201ENSMUST00000121067 758 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm25390-201ENSMUST00000157341 103 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm17065-201ENSMUST00000165245 239 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Mir5134-201ENSMUST00000175529 78 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Mir5710-201ENSMUST00000176884 69 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm38270-201ENSMUST00000192721 407 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm38080-201ENSMUST00000194035 268 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm45002-201ENSMUST00000208045 120 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm8274-201ENSMUST00000219820 463 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf43Q5NCP0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Rnf43Q5NCP0 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rnf43Q5NCP0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms