Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm5646-201ENSMUST00000120568 714 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm2005-201ENSMUST00000120759 542 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm23111-201ENSMUST00000122652 105 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm25334-201ENSMUST00000158036 110 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm22538-201ENSMUST00000158169 299 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm22766-201ENSMUST00000158372 99 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm23402-201ENSMUST00000178130 107 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm25873-201ENSMUST00000180317 107 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm26701-201ENSMUST00000181571 234 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm27676-201ENSMUST00000183669 61 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm28745-201ENSMUST00000190069 305 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm37576-201ENSMUST00000194228 372 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm44387-201ENSMUST00000196298 145 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm44393-201ENSMUST00000197418 138 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm44050-201ENSMUST00000204263 527 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm46136-201ENSMUST00000214730 565 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm31849-201ENSMUST00000220306 375 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm24622-201ENSMUST00000082619 162 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm25792-201ENSMUST00000083289 100 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usp28Q5I043 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.72□□□□□ -1.97
Usp28Q5I043 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usp28Q5I043 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usp28Q5I043 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm13082-201ENSMUST00000118877 561 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm15037-201ENSMUST00000120358 259 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm23642-201ENSMUST00000157858 258 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm23317-201ENSMUST00000157999 129 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm23473-201ENSMUST00000158883 116 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm27220-201ENSMUST00000183453 262 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm23448-201ENSMUST00000083151 104 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm25008-201ENSMUST00000083809 81 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Gm23850-201ENSMUST00000083830 169 ntBASIC2.71□□□□□ -1.98
Usp28Q5I043 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Usp28Q5I043 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm26002-201ENSMUST00000101915 107 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm14652-201ENSMUST00000118479 235 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm12016-201ENSMUST00000119079 681 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm14845-201ENSMUST00000121259 306 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Usp28Q5I043 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm20415-201ENSMUST00000172877 423 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm25874-201ENSMUST00000178030 79 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm32222-201ENSMUST00000203296 298 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm44720-201ENSMUST00000206076 260 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm29754-201ENSMUST00000206269 358 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm44718-201ENSMUST00000206886 359 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.7□□□□□ -1.98
Usp28Q5I043 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Usp28Q5I043 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Usp28Q5I043 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.7□□□□□ -1.98
Usp28Q5I043 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Usp28Q5I043 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Usp28Q5I043 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms