Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm5374-201ENSMUST00000222868 657 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Upf3bQ3ULL6 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Upf3bQ3ULL6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm21286-201ENSMUST00000098035 545 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Mir542-201ENSMUST00000102186 85 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Mir1195-201ENSMUST00000116818 98 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm12598-201ENSMUST00000117333 830 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm14600-201ENSMUST00000121032 630 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm23463-201ENSMUST00000122468 99 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm23889-201ENSMUST00000122689 104 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm22560-201ENSMUST00000157332 120 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm25391-201ENSMUST00000157342 134 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm22517-201ENSMUST00000158265 136 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm23473-201ENSMUST00000158883 116 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm23005-201ENSMUST00000158950 136 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Mir8118-201ENSMUST00000183962 129 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm43659-201ENSMUST00000200894 628 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm45530-201ENSMUST00000211658 225 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm7753-201ENSMUST00000221007 867 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3bQ3ULL6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm12706-201ENSMUST00000121588 698 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm23588-201ENSMUST00000157659 99 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm20656-201ENSMUST00000176925 518 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm28637-201ENSMUST00000179424 345 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm43722-201ENSMUST00000196054 124 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm45445-201ENSMUST00000209586 232 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm18338-201ENSMUST00000222381 560 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm10038-201ENSMUST00000077233 441 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 Gm25628-201ENSMUST00000084002 105 ntBASIC2.51□□□□□ -2.01
Upf3bQ3ULL6 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm24274-201ENSMUST00000116787 124 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm2288-201ENSMUST00000118560 638 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm14602-201ENSMUST00000118625 340 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm14843-201ENSMUST00000119596 212 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm14593-201ENSMUST00000119948 294 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm13751-201ENSMUST00000120280 752 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm12071-201ENSMUST00000121968 469 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Mir3075-201ENSMUST00000175340 85 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm24925-201ENSMUST00000178157 107 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Mir6402-201ENSMUST00000183406 80 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm43228-201ENSMUST00000200735 264 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Snord104-201ENSMUST00000083192 70 ntBASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Upf3bQ3ULL6 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm14411-201ENSMUST00000121798 914 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm22794-201ENSMUST00000157228 306 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm9696-202ENSMUST00000191541 830 ntBASIC2.49□□□□□ -2.01
Upf3bQ3ULL6 Gm43355-201ENSMUST00000196541 346 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms