Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm7398-201ENSMUST00000178589 639 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm7391-201ENSMUST00000178680 639 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm7375-201ENSMUST00000179232 639 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm3681-201ENSMUST00000179940 639 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Mir6405-201ENSMUST00000184584 124 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm37616-201ENSMUST00000193974 322 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm42465-201ENSMUST00000197036 492 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Mir421-201ENSMUST00000083575 76 ntBASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Upf3aQ3ULJ3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm12891-201ENSMUST00000119358 240 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm5937-201ENSMUST00000119715 643 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm22957-201ENSMUST00000122511 123 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm22227-201ENSMUST00000157356 259 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm9696-202ENSMUST00000191541 830 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm30341-201ENSMUST00000194363 289 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm45023-201ENSMUST00000207951 379 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm45530-201ENSMUST00000211658 225 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm25131-201ENSMUST00000082653 151 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Mir465-201ENSMUST00000093563 74 ntBASIC2.72□□□□□ -1.97
Upf3aQ3ULJ3 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm14731-201ENSMUST00000119216 376 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Snrpert-201ENSMUST00000121967 279 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm25866-201ENSMUST00000158245 112 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm23777-201ENSMUST00000158994 259 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm22307-201ENSMUST00000180019 107 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm27220-201ENSMUST00000183453 262 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm29389-201ENSMUST00000191562 352 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm2719-201ENSMUST00000191929 444 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm38280-201ENSMUST00000192610 158 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm43541-201ENSMUST00000197208 581 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm42958-201ENSMUST00000197595 318 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm23939-201ENSMUST00000082880 133 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.71□□□□□ -1.98
Upf3aQ3ULJ3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm14125-201ENSMUST00000113442 680 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm7974-201ENSMUST00000117154 408 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm13880-201ENSMUST00000118421 474 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm13603-201ENSMUST00000119404 83 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm25979-201ENSMUST00000157177 138 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm22839-201ENSMUST00000158436 304 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm8338-201ENSMUST00000163928 363 ntBASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.7□□□□□ -1.98
Upf3aQ3ULJ3 Snord53-201ENSMUST00000175146 78 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms