Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm24430-201ENSMUST00000104077 104 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm24068-201ENSMUST00000104513 132 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm12782-201ENSMUST00000117519 727 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm13454-201ENSMUST00000118166 483 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm14897-201ENSMUST00000118213 207 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm11357-201ENSMUST00000119758 954 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm15272-201ENSMUST00000120865 233 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm11229-201ENSMUST00000121993 437 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm23885-201ENSMUST00000122682 294 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm24787-201ENSMUST00000157380 123 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm23409-201ENSMUST00000158516 237 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Snord93-201ENSMUST00000175580 71 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm24019-201ENSMUST00000178620 107 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm26243-201ENSMUST00000179260 107 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm28474-201ENSMUST00000188501 315 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm29600-201ENSMUST00000188687 377 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm22249-201ENSMUST00000082485 136 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm23296-201ENSMUST00000082555 107 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm24859-201ENSMUST00000082729 107 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
Trafd1Q3UDK1 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm13082-201ENSMUST00000118877 561 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm15113-201ENSMUST00000119280 836 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm15177-201ENSMUST00000120491 577 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm12706-201ENSMUST00000121588 698 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm12071-201ENSMUST00000121968 469 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm22330-201ENSMUST00000158068 115 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm18396-201ENSMUST00000177095 361 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm22584-201ENSMUST00000177935 92 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm29550-201ENSMUST00000185543 285 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm28437-201ENSMUST00000190277 783 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm43114-201ENSMUST00000198298 343 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm18015-201ENSMUST00000214879 316 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm26128-201ENSMUST00000083170 110 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trafd1Q3UDK1 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm14359-201ENSMUST00000118883 424 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm12891-201ENSMUST00000119358 240 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm9498-201ENSMUST00000140849 291 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm22390-201ENSMUST00000157588 325 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Snord53-201ENSMUST00000175146 78 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm37641-201ENSMUST00000193837 239 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm31230-201ENSMUST00000199725 785 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm45273-201ENSMUST00000211559 281 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm23733-201ENSMUST00000083750 106 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms