Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm24780-201ENSMUST00000157635 143 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm22769-201ENSMUST00000158367 98 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm23198-201ENSMUST00000158811 91 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm24713-201ENSMUST00000178850 107 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm22633-201ENSMUST00000179834 107 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm25448-201ENSMUST00000180065 107 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm24518-201ENSMUST00000180275 94 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm10105-201ENSMUST00000184601 270 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm29218-205ENSMUST00000190846 615 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm6510-201ENSMUST00000195916 574 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm44373-201ENSMUST00000196112 169 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm42594-201ENSMUST00000199511 246 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm34091-201ENSMUST00000200875 604 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm44718-201ENSMUST00000206886 359 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm44927-201ENSMUST00000207573 716 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rnf180Q3U827 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.54□□□□□ -1.68
Rnf180Q3U827 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.54□□□□□ -1.68
Rnf180Q3U827 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm24889-201ENSMUST00000104388 132 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm26020-201ENSMUST00000122729 183 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm25392-201ENSMUST00000157335 297 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm25361-201ENSMUST00000179358 76 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm37313-201ENSMUST00000191673 290 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm37455-201ENSMUST00000191993 529 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm43155-201ENSMUST00000202661 494 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm44870-201ENSMUST00000207291 357 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm24460-201ENSMUST00000082731 106 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm23645-201ENSMUST00000083228 108 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Mir30e-201ENSMUST00000083475 92 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Snord7-201ENSMUST00000083781 97 ntBASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Rnf180Q3U827 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Mir676-201ENSMUST00000102443 89 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Mir105-201ENSMUST00000104655 80 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm11229-201ENSMUST00000121993 437 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm26041-201ENSMUST00000158148 108 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm4222-201ENSMUST00000165784 470 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm27903-201ENSMUST00000175482 126 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm27374-201ENSMUST00000183660 81 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm27640-201ENSMUST00000184580 147 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm27490-201ENSMUST00000184754 128 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm19193-201ENSMUST00000190263 590 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm42694-201ENSMUST00000196951 358 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm44016-201ENSMUST00000203463 164 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms