Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm24909-201ENSMUST00000157290 280 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm26061-201ENSMUST00000175584 108 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21842-201ENSMUST00000177552 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21626-201ENSMUST00000177791 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21562-201ENSMUST00000177888 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21539-201ENSMUST00000177925 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17522-201ENSMUST00000178144 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21599-201ENSMUST00000178249 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21914-201ENSMUST00000178452 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21723-201ENSMUST00000178692 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21916-201ENSMUST00000178771 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21801-201ENSMUST00000178865 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21633-201ENSMUST00000178941 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17412-201ENSMUST00000179261 468 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21821-201ENSMUST00000179646 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21588-201ENSMUST00000180074 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21780-201ENSMUST00000180128 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21572-201ENSMUST00000180134 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm21529-201ENSMUST00000180175 498 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Mir6401-201ENSMUST00000184499 109 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm29370-202ENSMUST00000187476 499 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm37418-201ENSMUST00000195031 274 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm37575-201ENSMUST00000195467 309 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm19366-201ENSMUST00000206996 156 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col17a1Q07563 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.29□□□□□ -1.56
Col17a1Q07563 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm25636-201ENSMUST00000082666 133 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm23093-201ENSMUST00000083450 102 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col17a1Q07563 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col17a1Q07563 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm28299-201ENSMUST00000189908 339 ntBASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm9632-201ENSMUST00000195934 643 ntBASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.28□□□□□ -1.56
Col17a1Q07563 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Gm22423-201ENSMUST00000082861 184 ntBASIC5.28□□□□□ -1.56
Col17a1Q07563 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col17a1Q07563 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm14652-201ENSMUST00000118479 235 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm8217-201ENSMUST00000119136 465 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm14238-201ENSMUST00000120227 323 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm24901-201ENSMUST00000158125 110 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm24863-201ENSMUST00000179499 107 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm21978-201ENSMUST00000179696 377 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm27893-201ENSMUST00000184408 194 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm42805-201ENSMUST00000196158 276 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm19202-201ENSMUST00000198096 808 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm43026-201ENSMUST00000202972 325 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm44161-201ENSMUST00000203532 253 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm45150-201ENSMUST00000206051 467 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
Col17a1Q07563 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm22979-201ENSMUST00000082609 159 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm24316-201ENSMUST00000083041 107 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm22169-201ENSMUST00000083229 107 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.27□□□□□ -1.57
Col17a1Q07563 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col17a1Q07563 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.26□□□□□ -1.57
Col17a1Q07563 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col17a1Q07563 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col17a1Q07563 Gm6587-201ENSMUST00000120219 613 ntBASIC5.26□□□□□ -1.57
Col17a1Q07563 Gm25280-201ENSMUST00000157269 101 ntBASIC5.26□□□□□ -1.57
Col17a1Q07563 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.26□□□□□ -1.57
Col17a1Q07563 Gm23568-201ENSMUST00000177960 92 ntBASIC5.26□□□□□ -1.57
Col17a1Q07563 Gm22348-201ENSMUST00000178674 79 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms