Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm26320-201ENSMUST00000157742 306 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm37801-201ENSMUST00000194754 274 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm5876-201ENSMUST00000203735 243 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm18306-201ENSMUST00000207338 569 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Snord47-201ENSMUST00000083034 77 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm22868-201ENSMUST00000083955 164 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
Col6a1Q04857 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a1Q04857 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Mir743b-201ENSMUST00000104751 77 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm14890-201ENSMUST00000117660 676 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm15026-201ENSMUST00000119219 458 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm22538-201ENSMUST00000158169 299 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm16232-201ENSMUST00000162856 167 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm5258-201ENSMUST00000165437 327 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm37692-201ENSMUST00000192633 232 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm17811-201ENSMUST00000206193 387 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm7726-201ENSMUST00000206241 231 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm44543-201ENSMUST00000209136 396 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm45327-201ENSMUST00000211612 565 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a1Q04857 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm26497-201ENSMUST00000083146 107 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm26329-201ENSMUST00000093723 110 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a1Q04857 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a1Q04857 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a1Q04857 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Mir690-201ENSMUST00000102110 109 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm14825-201ENSMUST00000113538 701 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm12311-201ENSMUST00000118803 374 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm25177-201ENSMUST00000122634 117 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm23759-201ENSMUST00000158351 268 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm23312-201ENSMUST00000158774 102 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm17528-201ENSMUST00000171026 239 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Mir6345-201ENSMUST00000184286 128 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a1Q04857 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.78□□□□□ -1.64
Col6a1Q04857 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a1Q04857 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col6a1Q04857 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
Col6a1Q04857 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
Col6a1Q04857 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
Col6a1Q04857 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Mir599-201ENSMUST00000102378 88 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm24281-201ENSMUST00000104234 136 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm12719-201ENSMUST00000118859 241 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm8217-201ENSMUST00000119136 465 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm14841-201ENSMUST00000121067 758 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm23391-201ENSMUST00000157579 104 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm22598-201ENSMUST00000157600 127 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms