Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir322-201ENSMUST00000083484 95 ntBASIC2□□□□□ -2.09
Nkx3-1P97436 Gm23104-201ENSMUST00000083722 104 ntBASIC2□□□□□ -2.09
Nkx3-1P97436 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Nkx3-1P97436 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Nkx3-1P97436 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Nkx3-1P97436 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm12941-201ENSMUST00000117934 220 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm12881-201ENSMUST00000121191 203 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm11363-201ENSMUST00000121672 548 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm22769-201ENSMUST00000158367 98 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm23548-201ENSMUST00000158963 106 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm28011-201ENSMUST00000184097 175 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm19252-201ENSMUST00000204705 305 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm45445-201ENSMUST00000209586 232 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm46194-201ENSMUST00000218136 320 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm25199-201ENSMUST00000083095 104 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Gm25628-201ENSMUST00000084002 105 ntBASIC1.99□□□□□ -2.09
Nkx3-1P97436 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Nkx3-1P97436 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Nkx3-1P97436 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm25094-201ENSMUST00000103992 131 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm23431-201ENSMUST00000104006 107 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm23951-201ENSMUST00000104029 132 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm15125-201ENSMUST00000116185 800 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm16053-201ENSMUST00000120511 188 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm23867-201ENSMUST00000122649 274 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm25981-201ENSMUST00000157921 295 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Mir1927-201ENSMUST00000158579 109 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm24813-201ENSMUST00000175310 84 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8676-201ENSMUST00000184206 637 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Mir6997-201ENSMUST00000184313 71 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm37989-201ENSMUST00000195202 803 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm43626-201ENSMUST00000198575 162 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm44212-201ENSMUST00000205016 897 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm18000-201ENSMUST00000212153 800 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8031-201ENSMUST00000213430 626 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Nkx3-1P97436 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.98□□□□□ -2.09
Nkx3-1P97436 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Nkx3-1P97436 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm12697-201ENSMUST00000118008 667 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm11693-201ENSMUST00000119625 565 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm14599-201ENSMUST00000120469 474 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm23476-201ENSMUST00000158881 274 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm24969-201ENSMUST00000180331 79 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm3489-201ENSMUST00000190083 528 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm45316-201ENSMUST00000210128 162 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm20948-201ENSMUST00000211091 449 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm24928-201ENSMUST00000083399 107 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm25897-201ENSMUST00000083709 107 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.97□□□□□ -2.09
Nkx3-1P97436 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm26077-201ENSMUST00000104064 123 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm11460-201ENSMUST00000118200 361 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm14600-201ENSMUST00000121032 630 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms