Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1285-201ENSMUST00000208523 903 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Rfx1P48377 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rfx1P48377 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.16□□□□□ -1.58
Rfx1P48377 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rfx1P48377 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Rfx1P48377 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Rfx1P48377 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Rfx1P48377 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Rfx1P48377 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Rfx1P48377 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Rfx1P48377 Gm23941-201ENSMUST00000101953 107 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm23948-201ENSMUST00000104030 132 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm15075-201ENSMUST00000122187 477 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm23752-201ENSMUST00000157584 115 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Mir6963-201ENSMUST00000183535 71 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm27940-201ENSMUST00000184449 98 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm28118-201ENSMUST00000185957 294 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.15□□□□□ -1.59
Rfx1P48377 Gm34073-201ENSMUST00000195736 212 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Rfx1P48377 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Mir10a-201ENSMUST00000083585 110 ntBASIC5.15□□□□□ -1.59
Rfx1P48377 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rfx1P48377 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Rfx1P48377 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rfx1P48377 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx1P48377 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx1P48377 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rfx1P48377 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx1P48377 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm11794-201ENSMUST00000119446 237 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm12785-201ENSMUST00000122052 172 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm24188-201ENSMUST00000157980 108 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm23638-201ENSMUST00000175073 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm23158-201ENSMUST00000175076 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm22907-201ENSMUST00000175198 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm22625-201ENSMUST00000175382 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm22875-201ENSMUST00000175449 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm25197-201ENSMUST00000175516 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm27857-201ENSMUST00000176930 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm26268-201ENSMUST00000177685 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm23681-201ENSMUST00000178821 126 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Mir7031-201ENSMUST00000183860 65 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm28288-201ENSMUST00000191019 214 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm25203-202ENSMUST00000200458 216 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm45403-201ENSMUST00000209453 276 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm45313-201ENSMUST00000210584 178 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Rfx1P48377 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm25203-201ENSMUST00000082842 215 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm26066-201ENSMUST00000083385 109 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Mir30b-201ENSMUST00000083542 96 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Mir28a-201ENSMUST00000083560 86 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Mir496a-201ENSMUST00000093627 79 ntBASIC5.14□□□□□ -1.59
Rfx1P48377 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rfx1P48377 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx1P48377 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx1P48377 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx1P48377 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Rfx1P48377 Gm22936-201ENSMUST00000103955 126 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx1P48377 Gm11600-201ENSMUST00000119592 240 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.13□□□□□ -1.59
Rfx1P48377 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx1P48377 Gm27926-201ENSMUST00000157180 66 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm24898-201ENSMUST00000158133 106 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm22611-201ENSMUST00000158288 150 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm25486-201ENSMUST00000158726 63 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm28534-201ENSMUST00000187744 676 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm42621-201ENSMUST00000198114 275 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm25410-201ENSMUST00000083758 137 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx1P48377 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx1P48377 Synpr-207ENSMUST00000223583 3362 ntBASIC5.13□□□□□ -1.59
Rfx1P48377 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Rfx1P48377 Gm12719-201ENSMUST00000118859 241 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms