Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.5□□□□□ -2.01
P20040 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
P20040 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
P20040 Gm2066-201ENSMUST00000118046 389 ntBASIC2.49□□□□□ -2.01
P20040 Gm14020-201ENSMUST00000118165 662 ntBASIC2.49□□□□□ -2.01
P20040 Gm11819-201ENSMUST00000122192 372 ntBASIC2.49□□□□□ -2.01
P20040 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.49□□□□□ -2.01
P20040 Gm23668-201ENSMUST00000157465 111 ntBASIC2.49□□□□□ -2.01
P20040 Gm25637-201ENSMUST00000157529 107 ntBASIC2.49□□□□□ -2.01
P20040 Gm25066-201ENSMUST00000158145 123 ntBASIC2.49□□□□□ -2.01
P20040 Gm22416-201ENSMUST00000158590 88 ntBASIC2.49□□□□□ -2.01
P20040 Gm25119-201ENSMUST00000158815 88 ntBASIC2.49□□□□□ -2.01
P20040 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Gm17162-201ENSMUST00000168538 473 ntBASIC2.49□□□□□ -2.01
P20040 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.49□□□□□ -2.01
P20040 Gm26195-201ENSMUST00000175035 101 ntBASIC2.49□□□□□ -2.01
P20040 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.49□□□□□ -2.01
P20040 Gm24019-201ENSMUST00000178620 107 ntBASIC2.49□□□□□ -2.01
P20040 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Gm26243-201ENSMUST00000179260 107 ntBASIC2.49□□□□□ -2.01
P20040 Gm19257-201ENSMUST00000186121 183 ntBASIC2.49□□□□□ -2.01
P20040 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.49□□□□□ -2.01
P20040 Gm18748-201ENSMUST00000198507 622 ntBASIC2.49□□□□□ -2.01
P20040 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.49□□□□□ -2.01
P20040 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.49□□□□□ -2.01
P20040 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.49□□□□□ -2.01
P20040 Gm45105-201ENSMUST00000207824 397 ntBASIC2.49□□□□□ -2.01
P20040 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.49□□□□□ -2.01
P20040 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.49□□□□□ -2.01
P20040 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.49□□□□□ -2.01
P20040 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.49□□□□□ -2.01
P20040 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.49□□□□□ -2.01
P20040 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
P20040 Gm23296-201ENSMUST00000082555 107 ntBASIC2.49□□□□□ -2.01
P20040 Gm24859-201ENSMUST00000082729 107 ntBASIC2.49□□□□□ -2.01
P20040 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
P20040 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.49□□□□□ -2.01
P20040 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
P20040 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
P20040 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.49□□□□□ -2.01
P20040 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
P20040 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
P20040 Gm9009-201ENSMUST00000117321 326 ntBASIC2.48□□□□□ -2.01
P20040 Gm14594-201ENSMUST00000118052 537 ntBASIC2.48□□□□□ -2.01
P20040 Gm14590-201ENSMUST00000118934 537 ntBASIC2.48□□□□□ -2.01
P20040 Gm15177-201ENSMUST00000120491 577 ntBASIC2.48□□□□□ -2.01
P20040 Gm11582-201ENSMUST00000121041 236 ntBASIC2.48□□□□□ -2.01
P20040 Gm11384-201ENSMUST00000121376 303 ntBASIC2.48□□□□□ -2.01
P20040 Gm14694-201ENSMUST00000121856 282 ntBASIC2.48□□□□□ -2.01
P20040 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.48□□□□□ -2.01
P20040 Gm25283-201ENSMUST00000157272 77 ntBASIC2.48□□□□□ -2.01
P20040 Gm22560-201ENSMUST00000157332 120 ntBASIC2.48□□□□□ -2.01
P20040 Gm22765-201ENSMUST00000158371 128 ntBASIC2.48□□□□□ -2.01
P20040 Gm26215-201ENSMUST00000158584 139 ntBASIC2.48□□□□□ -2.01
P20040 Gm24876-201ENSMUST00000158780 92 ntBASIC2.48□□□□□ -2.01
P20040 Gm22858-201ENSMUST00000174972 76 ntBASIC2.48□□□□□ -2.01
P20040 Snord53-201ENSMUST00000175146 78 ntBASIC2.48□□□□□ -2.01
P20040 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
P20040 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
P20040 Gm26189-201ENSMUST00000179879 107 ntBASIC2.48□□□□□ -2.01
P20040 Gm14596-201ENSMUST00000180268 537 ntBASIC2.48□□□□□ -2.01
P20040 Gm14595-201ENSMUST00000180335 537 ntBASIC2.48□□□□□ -2.01
P20040 Mir7k-201ENSMUST00000184115 110 ntBASIC2.48□□□□□ -2.01
P20040 Gm7329-201ENSMUST00000185915 210 ntBASIC2.48□□□□□ -2.01
P20040 Gm28358-202ENSMUST00000189292 223 ntBASIC2.48□□□□□ -2.01
P20040 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
P20040 Gm6140-201ENSMUST00000192494 966 ntBASIC2.48□□□□□ -2.01
P20040 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.48□□□□□ -2.01
P20040 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.48□□□□□ -2.01
P20040 Gm44476-201ENSMUST00000196225 91 ntBASIC2.48□□□□□ -2.01
P20040 Gm24350-202ENSMUST00000198309 132 ntBASIC2.48□□□□□ -2.01
P20040 Gm43026-201ENSMUST00000202972 325 ntBASIC2.48□□□□□ -2.01
P20040 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.48□□□□□ -2.01
P20040 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.48□□□□□ -2.01
P20040 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.48□□□□□ -2.01
P20040 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.48□□□□□ -2.01
P20040 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.48□□□□□ -2.01
P20040 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
P20040 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
P20040 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
P20040 Gm26055-201ENSMUST00000083038 107 ntBASIC2.48□□□□□ -2.01
P20040 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
P20040 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
P20040 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
P20040 Gm23747-201ENSMUST00000104228 131 ntBASIC2.47□□□□□ -2.01
P20040 Gm14918-201ENSMUST00000118153 268 ntBASIC2.47□□□□□ -2.01
P20040 Gm13349-201ENSMUST00000118436 411 ntBASIC2.47□□□□□ -2.01
P20040 Gm11813-201ENSMUST00000118586 291 ntBASIC2.47□□□□□ -2.01
P20040 Gm14815-201ENSMUST00000120060 488 ntBASIC2.47□□□□□ -2.01
P20040 Gm22390-201ENSMUST00000157588 325 ntBASIC2.47□□□□□ -2.01
P20040 Gm22330-201ENSMUST00000158068 115 ntBASIC2.47□□□□□ -2.01
P20040 Gm3221-201ENSMUST00000164869 440 ntBASIC2.47□□□□□ -2.01
P20040 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
P20040 Gm24100-201ENSMUST00000178592 79 ntBASIC2.47□□□□□ -2.01
P20040 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.47□□□□□ -2.01
P20040 Gm28956-201ENSMUST00000189047 427 ntBASIC2.47□□□□□ -2.01
P20040 Gm28466-201ENSMUST00000190678 659 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms