Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15106-201ENSMUST00000119691 821 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm12045-201ENSMUST00000122122 573 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm15466-201ENSMUST00000122299 333 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm25519-201ENSMUST00000158392 127 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm26362-201ENSMUST00000158865 315 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm6788-201ENSMUST00000166459 270 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Sdc1P18828 Gm25194-201ENSMUST00000177987 79 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm21816-201ENSMUST00000179255 360 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm23816-201ENSMUST00000179617 132 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm21726-201ENSMUST00000179654 392 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm27783-201ENSMUST00000183534 105 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm28744-201ENSMUST00000189939 340 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm37568-201ENSMUST00000191755 364 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm18341-201ENSMUST00000197538 622 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm43669-201ENSMUST00000198229 436 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm44554-201ENSMUST00000208738 147 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Gm45522-201ENSMUST00000210784 166 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Sdc1P18828 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Sdc1P18828 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Sdc1P18828 Gm26206-201ENSMUST00000082908 110 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Mir346-201ENSMUST00000083547 98 ntBASIC2.26□□□□□ -2.05
Sdc1P18828 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Sdc1P18828 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm25169-201ENSMUST00000104190 129 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm14073-201ENSMUST00000117344 381 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm12386-201ENSMUST00000117380 688 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm9440-201ENSMUST00000119667 539 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm15177-201ENSMUST00000120491 577 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm6762-201ENSMUST00000121769 289 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm4540-201ENSMUST00000170669 429 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Mir3104-201ENSMUST00000174911 63 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Mir5099-201ENSMUST00000175257 74 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm20651-201ENSMUST00000177219 329 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Mir6385-201ENSMUST00000184295 105 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm29184-201ENSMUST00000190038 334 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.25□□□□□ -2.05
Sdc1P18828 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
Sdc1P18828 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.25□□□□□ -2.05
Sdc1P18828 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
Sdc1P18828 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.25□□□□□ -2.05
Sdc1P18828 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Sdc1P18828 Gm24280-201ENSMUST00000104237 134 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.24□□□□□ -2.05
Sdc1P18828 Gm14825-201ENSMUST00000113538 701 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm12427-201ENSMUST00000117719 302 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm14897-201ENSMUST00000118213 207 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm7363-201ENSMUST00000119883 399 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm5646-201ENSMUST00000120568 714 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm14736-201ENSMUST00000121470 336 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm23867-201ENSMUST00000122649 274 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.24□□□□□ -2.05
Sdc1P18828 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.24□□□□□ -2.05
Sdc1P18828 Gm23168-201ENSMUST00000157156 143 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm24082-201ENSMUST00000175175 83 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm17946-201ENSMUST00000186856 538 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Gm9068-201ENSMUST00000217393 455 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc1P18828 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.24□□□□□ -2.05
Sdc1P18828 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc1P18828 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Sdc1P18828 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms