Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Cdx1P18111 Gm22939-201ENSMUST00000103958 131 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm22270-201ENSMUST00000104034 132 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm13640-201ENSMUST00000118445 264 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm15103-201ENSMUST00000119893 871 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdx1P18111 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.34□□□□□ -2.03
Cdx1P18111 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.34□□□□□ -2.03
Cdx1P18111 Gm25621-201ENSMUST00000157223 114 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm23137-201ENSMUST00000157559 107 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm24960-201ENSMUST00000157923 90 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm26215-201ENSMUST00000158584 139 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.34□□□□□ -2.03
Cdx1P18111 Gm20415-201ENSMUST00000172877 423 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm26928-201ENSMUST00000182674 572 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdx1P18111 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm38214-201ENSMUST00000192581 988 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm3442-201ENSMUST00000216808 710 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.34□□□□□ -2.03
Cdx1P18111 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Snora23-201ENSMUST00000082517 184 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm24254-201ENSMUST00000083702 104 ntBASIC2.34□□□□□ -2.03
Cdx1P18111 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdx1P18111 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Cdx1P18111 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23691-201ENSMUST00000101878 107 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26504-201ENSMUST00000102033 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm22151-201ENSMUST00000116963 58 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm14358-201ENSMUST00000118458 403 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm13194-201ENSMUST00000142299 311 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23895-201ENSMUST00000158108 160 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26502-201ENSMUST00000177732 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25350-201ENSMUST00000177849 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23446-201ENSMUST00000177977 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26201-201ENSMUST00000178047 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm24711-201ENSMUST00000178062 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm24609-201ENSMUST00000178166 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23265-201ENSMUST00000178321 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm22812-201ENSMUST00000178329 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26246-201ENSMUST00000178388 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25155-201ENSMUST00000178450 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm24760-201ENSMUST00000178530 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm22285-201ENSMUST00000178576 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm22417-201ENSMUST00000178656 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26270-201ENSMUST00000178690 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23313-201ENSMUST00000178931 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23089-201ENSMUST00000178947 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm24153-201ENSMUST00000179280 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25597-201ENSMUST00000179388 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25816-201ENSMUST00000179764 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26188-201ENSMUST00000179963 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm26433-201ENSMUST00000180227 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm22128-201ENSMUST00000180346 94 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm28755-201ENSMUST00000185773 199 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm28282-201ENSMUST00000186072 186 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25203-202ENSMUST00000200458 216 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm29754-201ENSMUST00000206269 358 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx1P18111 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms