Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mir1966-201ENSMUST00000158807 108 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm23415-201ENSMUST00000175519 83 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm16404-201ENSMUST00000177739 468 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm22367-201ENSMUST00000178930 132 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm6660-201ENSMUST00000179149 468 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm14598-201ENSMUST00000180109 468 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm14625-201ENSMUST00000180231 468 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm29005-201ENSMUST00000186773 320 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Mir6516-201ENSMUST00000196236 110 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm20368-201ENSMUST00000220716 301 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm23514-201ENSMUST00000082827 130 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.07□□□□□ -1.76
Hoxd3P09027 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd3P09027 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd3P09027 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm26300-201ENSMUST00000102282 94 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm13343-201ENSMUST00000116474 105 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm14069-201ENSMUST00000120815 229 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm25805-201ENSMUST00000122788 108 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm24186-201ENSMUST00000157983 127 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm23196-201ENSMUST00000158806 107 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm27543-201ENSMUST00000183562 177 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Ighv15-1-201ENSMUST00000194450 276 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm43649-201ENSMUST00000196596 391 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm43220-201ENSMUST00000199299 282 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Mir134-201ENSMUST00000083492 71 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm25896-201ENSMUST00000083713 136 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Hoxd3P09027 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.06□□□□□ -1.76
Hoxd3P09027 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Hoxd3P09027 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd3P09027 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd3P09027 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Mir1193-201ENSMUST00000116761 121 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm15148-201ENSMUST00000117602 156 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm11673-201ENSMUST00000117846 331 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm25293-201ENSMUST00000122792 285 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm22725-201ENSMUST00000158092 110 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Mir3090-201ENSMUST00000175597 87 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm2011-203ENSMUST00000203750 435 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm23927-201ENSMUST00000082466 215 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm24706-201ENSMUST00000082806 137 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm24611-201ENSMUST00000083272 107 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm25257-201ENSMUST00000083907 110 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.05□□□□□ -1.76
Hoxd3P09027 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd3P09027 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm11912-201ENSMUST00000117235 264 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm12982-201ENSMUST00000117408 190 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms