Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm12370-201ENSMUST00000117809 604 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm13167-201ENSMUST00000118554 578 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm8217-201ENSMUST00000119136 465 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm13873-201ENSMUST00000119208 427 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.13□□□□□ -1.91
Hcn1O88704 Gm23168-201ENSMUST00000157156 143 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm25621-201ENSMUST00000157223 114 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm26101-201ENSMUST00000157246 105 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm25283-201ENSMUST00000157272 77 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm24784-201ENSMUST00000157640 62 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm23078-201ENSMUST00000157848 148 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hcn1O88704 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Hcn1O88704 Gm18296-201ENSMUST00000192475 783 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm29950-201ENSMUST00000195273 237 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm19089-201ENSMUST00000197207 613 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.13□□□□□ -1.91
Hcn1O88704 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm7751-201ENSMUST00000212868 709 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.13□□□□□ -1.91
Hcn1O88704 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Gm23650-201ENSMUST00000083355 70 ntBASIC3.13□□□□□ -1.91
Hcn1O88704 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hcn1O88704 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hcn1O88704 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm14366-201ENSMUST00000121970 730 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm22957-201ENSMUST00000122511 123 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.12□□□□□ -1.91
Hcn1O88704 Gm22793-201ENSMUST00000157227 330 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm22225-201ENSMUST00000157358 278 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm23671-201ENSMUST00000157472 103 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.12□□□□□ -1.91
Hcn1O88704 Gm27028-201ENSMUST00000182303 399 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm28591-201ENSMUST00000185259 183 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm28314-201ENSMUST00000191276 345 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm32340-201ENSMUST00000192883 259 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm6510-201ENSMUST00000195916 574 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm43227-201ENSMUST00000202239 677 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm44084-201ENSMUST00000203947 409 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm45387-201ENSMUST00000209792 632 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm45312-201ENSMUST00000210566 311 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Gm24533-201ENSMUST00000083138 196 ntBASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hcn1O88704 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Hcn1O88704 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm14825-201ENSMUST00000113538 701 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm14622-201ENSMUST00000117117 468 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm13692-201ENSMUST00000120774 371 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm11384-201ENSMUST00000121376 303 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm12770-201ENSMUST00000121734 462 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm25107-201ENSMUST00000122472 129 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm22452-201ENSMUST00000122804 104 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm12238-201ENSMUST00000127764 124 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm23981-201ENSMUST00000157136 106 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Mir6413-201ENSMUST00000184049 108 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm7858-201ENSMUST00000190177 622 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hcn1O88704 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.11□□□□□ -1.91
Hcn1O88704 Gm17906-201ENSMUST00000202480 901 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Gm22304-201ENSMUST00000082688 129 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.11□□□□□ -1.91
Hcn1O88704 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hcn1O88704 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hcn1O88704 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.1□□□□□ -1.91
Hcn1O88704 Gm25507-201ENSMUST00000116981 144 ntBASIC3.1□□□□□ -1.91
Hcn1O88704 Gm13228-201ENSMUST00000118937 634 ntBASIC3.1□□□□□ -1.91
Hcn1O88704 Gm12897-201ENSMUST00000120341 250 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms