Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col5a1O88207 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm23448-201ENSMUST00000083151 104 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm14652-201ENSMUST00000118479 235 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm16053-201ENSMUST00000120511 188 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm12383-201ENSMUST00000120628 760 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm15529-201ENSMUST00000121833 994 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm16510-201ENSMUST00000153501 249 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm25981-201ENSMUST00000157921 295 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.05□□□□□ -2.08
Col5a1O88207 Gm37290-201ENSMUST00000195775 339 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm43626-201ENSMUST00000198575 162 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm43979-201ENSMUST00000203179 475 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Gm7407-201ENSMUST00000208301 568 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.05□□□□□ -2.08
Col5a1O88207 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Col5a1O88207 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col5a1O88207 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm23111-201ENSMUST00000122652 105 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.04□□□□□ -2.08
Col5a1O88207 Gm25555-201ENSMUST00000158078 111 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm24969-201ENSMUST00000180331 79 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Gm6501-201ENSMUST00000187178 916 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm37616-201ENSMUST00000193974 322 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Col5a1O88207 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm4263-202ENSMUST00000221392 667 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col5a1O88207 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col5a1O88207 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col5a1O88207 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Col5a1O88207 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col5a1O88207 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col5a1O88207 BC022960-201ENSMUST00000119987 1815 ntBASIC2.04□□□□□ -2.08
Col5a1O88207 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col5a1O88207 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Col5a1O88207 Gm13678-201ENSMUST00000118926 340 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm12096-201ENSMUST00000121149 829 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm14905-201ENSMUST00000122351 639 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col5a1O88207 Gm23034-201ENSMUST00000158001 147 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm25413-201ENSMUST00000158544 312 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm23179-201ENSMUST00000158693 304 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm2855-201ENSMUST00000166765 456 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col5a1O88207 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Zfp950-206ENSMUST00000178819 171 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm44181-201ENSMUST00000203106 483 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col5a1O88207 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col5a1O88207 Gm25403-201ENSMUST00000082971 143 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Gm26176-201ENSMUST00000083795 105 ntBASIC2.03□□□□□ -2.08
Col5a1O88207 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col5a1O88207 Gm23256-201ENSMUST00000102235 110 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm14932-201ENSMUST00000117112 453 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm26424-201ENSMUST00000122530 104 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm25318-201ENSMUST00000122554 314 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms