Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 Gm43882-201ENSMUST00000204871 2264 ntBASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 Gm23960-201ENSMUST00000157206 131 ntBASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.58□□□□□ -2.16
Col6a3E9PWQ3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm24048-201ENSMUST00000102411 106 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm22668-201ENSMUST00000158716 260 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm44478-201ENSMUST00000204875 114 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm24594-201ENSMUST00000122502 99 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 AC133598.4-202ENSMUST00000225267 469 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Gm8292-201ENSMUST00000162574 396 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Snora24-201ENSMUST00000174989 130 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 AC159297.1-201ENSMUST00000218689 290 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.57□□□□□ -2.16
Col6a3E9PWQ3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm29262-201ENSMUST00000190084 196 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm43662-201ENSMUST00000198310 2271 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm12721-201ENSMUST00000120621 268 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm37708-201ENSMUST00000192337 895 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm44830-201ENSMUST00000207667 584 ntBASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Col6a3E9PWQ3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm12401-201ENSMUST00000118435 228 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm15530-201ENSMUST00000122206 555 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm26348-201ENSMUST00000157528 240 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm43894-201ENSMUST00000203274 688 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm6850-201ENSMUST00000210031 530 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm25506-201ENSMUST00000104339 70 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm44425-201ENSMUST00000203739 429 ntBASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a3E9PWQ3 Gm14355-201ENSMUST00000117352 264 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm22083-201ENSMUST00000157586 102 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm25883-201ENSMUST00000157781 271 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm25491-201ENSMUST00000158733 308 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm17162-201ENSMUST00000168538 473 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm22802-201ENSMUST00000175621 89 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm29460-201ENSMUST00000188607 714 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm18660-201ENSMUST00000199542 629 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Gm2855-201ENSMUST00000166765 456 ntBASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col6a3E9PWQ3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Gm26414-201ENSMUST00000157674 269 ntBASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Gm23893-201ENSMUST00000158106 134 ntBASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Gm22447-201ENSMUST00000158155 92 ntBASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Gm30674-201ENSMUST00000214523 392 ntBASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.53□□□□□ -2.16
Col6a3E9PWQ3 Gm24579-201ENSMUST00000103964 144 ntBASIC1.53□□□□□ -2.17
Col6a3E9PWQ3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Col6a3E9PWQ3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.53□□□□□ -2.17
Col6a3E9PWQ3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.53□□□□□ -2.17
Col6a3E9PWQ3 Gm25633-201ENSMUST00000178565 107 ntBASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Gm13640-201ENSMUST00000118445 264 ntBASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col6a3E9PWQ3 Gm11862-201ENSMUST00000119678 659 ntBASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Gm8502-201ENSMUST00000185708 901 ntBASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Gm21139-201ENSMUST00000186594 877 ntBASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Gm38214-201ENSMUST00000192581 988 ntBASIC1.51□□□□□ -2.17
Col6a3E9PWQ3 Gm10997-201ENSMUST00000210294 1500 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms