Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Scarna9-201ENSMUST00000104318 70 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm25724-201ENSMUST00000104531 117 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm14039-201ENSMUST00000118705 101 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm22514-201ENSMUST00000122547 308 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Snora47-201ENSMUST00000157483 138 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mir1983-201ENSMUST00000157523 132 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm22847-201ENSMUST00000157707 105 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm25884-201ENSMUST00000157782 62 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm25603-201ENSMUST00000158361 105 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mir1929-201ENSMUST00000158635 93 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm22888-201ENSMUST00000158640 77 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm24878-201ENSMUST00000158782 104 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm22650-201ENSMUST00000175138 105 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm27512-201ENSMUST00000175328 126 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm25019-201ENSMUST00000179732 110 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mir378d-201ENSMUST00000184232 110 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm37807-201ENSMUST00000194310 190 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm44342-201ENSMUST00000196874 129 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm44383-201ENSMUST00000198940 129 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm43907-201ENSMUST00000203128 117 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm10126-201ENSMUST00000221732 168 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mir106b-201ENSMUST00000083580 82 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Wdr6-201ENSMUST00000068700 4163 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm45112-201ENSMUST00000208576 5125 ntBASIC0.92□□□□□ -2.26
Gm4559A4IF42 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Otog-202ENSMUST00000209802 3558 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC0.92□□□□□ -2.26
Gm4559A4IF42 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms