Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm25274-201ENSMUST00000104296 135 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm12550-201ENSMUST00000118478 329 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm15106-201ENSMUST00000119691 821 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm14215-201ENSMUST00000120578 221 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Mir6393-201ENSMUST00000183709 94 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm38238-201ENSMUST00000194334 346 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm43765-201ENSMUST00000196303 893 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm25005-201ENSMUST00000083812 156 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Gm5670-201ENSMUST00000093546 372 ntBASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Col6a4A2AX52 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm13614-201ENSMUST00000117306 503 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm14253-201ENSMUST00000122112 639 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Mir6238-201ENSMUST00000184140 129 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm25090-201ENSMUST00000104000 132 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm22228-201ENSMUST00000157364 101 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm23340-201ENSMUST00000158955 123 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm17946-201ENSMUST00000186856 538 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm28163-201ENSMUST00000187099 325 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm19193-201ENSMUST00000190263 590 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm19457-201ENSMUST00000200995 448 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm22245-201ENSMUST00000082479 103 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Gm25796-201ENSMUST00000082645 163 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.45□□□□□ -2.18
Col6a4A2AX52 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm11577-201ENSMUST00000118030 737 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm12891-201ENSMUST00000119358 240 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm15452-201ENSMUST00000119877 240 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm12926-201ENSMUST00000121158 409 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm25971-201ENSMUST00000158953 286 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm37037-201ENSMUST00000194475 424 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm43201-201ENSMUST00000195925 3416 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm12765-201ENSMUST00000117273 615 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm11404-201ENSMUST00000120872 494 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm13913-201ENSMUST00000121126 260 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Mir1927-201ENSMUST00000158579 109 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Samd15-201ENSMUST00000169669 1194 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.44□□□□□ -2.18
Col6a4A2AX52 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Col6a4A2AX52 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm14537-201ENSMUST00000117464 599 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm23760-201ENSMUST00000158350 116 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm37934-201ENSMUST00000192902 402 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms