Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Scn1aA2APX8 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.31□□□□□ -2.04
Scn1aA2APX8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Scn1aA2APX8 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm24060-201ENSMUST00000157494 95 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm23754-201ENSMUST00000157576 63 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm22776-201ENSMUST00000178634 94 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm23767-201ENSMUST00000179278 94 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Npn2-202ENSMUST00000189275 235 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm38213-201ENSMUST00000193203 173 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm44092-201ENSMUST00000204470 258 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm15125-201ENSMUST00000116185 800 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm13082-201ENSMUST00000118877 561 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm16363-201ENSMUST00000132460 877 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm24475-201ENSMUST00000157435 143 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm22853-201ENSMUST00000174974 131 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm21827-201ENSMUST00000178247 423 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm7182-201ENSMUST00000193351 732 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Mir703-201ENSMUST00000197105 109 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm18645-201ENSMUST00000209593 651 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Gm23733-201ENSMUST00000083750 106 ntBASIC2.3□□□□□ -2.04
Scn1aA2APX8 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Scn1aA2APX8 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm15108-201ENSMUST00000116160 803 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm14943-201ENSMUST00000118056 546 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm11582-201ENSMUST00000121041 236 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm15111-201ENSMUST00000122142 878 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm24769-201ENSMUST00000158506 129 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm22307-201ENSMUST00000180019 107 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Mir8118-201ENSMUST00000183962 129 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm2544-201ENSMUST00000222702 756 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Olfr815-201ENSMUST00000071557 951 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm15312-201ENSMUST00000118827 271 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm15309-201ENSMUST00000121644 240 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm14903-201ENSMUST00000122435 537 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm22107-201ENSMUST00000122548 100 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm9785-202ENSMUST00000144563 593 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm25557-201ENSMUST00000158084 315 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm20415-201ENSMUST00000172877 423 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 Gm28623-201ENSMUST00000187219 192 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn1aA2APX8 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.29□□□□□ -2.04
Scn1aA2APX8 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn1aA2APX8 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn1aA2APX8 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn1aA2APX8 Mir667-201ENSMUST00000102441 92 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm12941-201ENSMUST00000117934 220 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm22026-201ENSMUST00000122735 281 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm29288-201ENSMUST00000191582 901 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm33571-201ENSMUST00000193271 657 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.28□□□□□ -2.04
Scn1aA2APX8 Gm29920-201ENSMUST00000206876 754 ntBASIC2.28□□□□□ -2.04
Scn1aA2APX8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.28□□□□□ -2.04
Scn1aA2APX8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn1aA2APX8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms