Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25784-201ENSMUST00000122524 81 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Mir3066-201ENSMUST00000175296 83 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm22716-201ENSMUST00000177596 107 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm22910-201ENSMUST00000178568 132 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm27236-201ENSMUST00000184147 442 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm37692-201ENSMUST00000192633 232 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm43541-201ENSMUST00000197208 581 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm7751-201ENSMUST00000212868 709 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm4921-201ENSMUST00000219804 992 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm2710-201ENSMUST00000073196 603 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Gm22508-201ENSMUST00000082772 110 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
H2afb1S4R1E0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm25833-201ENSMUST00000104137 133 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm26423-201ENSMUST00000104277 128 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm14293-201ENSMUST00000118528 577 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm12137-201ENSMUST00000119565 346 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm15142-201ENSMUST00000121013 856 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm14411-201ENSMUST00000121798 914 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm11819-201ENSMUST00000122192 372 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm23981-201ENSMUST00000157136 106 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Mir6541-201ENSMUST00000183649 110 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm28002-201ENSMUST00000184832 100 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm5116-201ENSMUST00000187732 463 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm29627-201ENSMUST00000187984 463 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm10193-201ENSMUST00000188288 231 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm37097-201ENSMUST00000193676 336 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm6510-201ENSMUST00000195916 574 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm19649-201ENSMUST00000201126 822 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm44274-201ENSMUST00000203417 256 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm44923-201ENSMUST00000206673 85 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm45366-201ENSMUST00000209828 384 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm19219-201ENSMUST00000215863 724 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm18774-201ENSMUST00000218269 601 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm9309-201ENSMUST00000223537 546 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H2afb1S4R1E0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm23577-201ENSMUST00000103950 110 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm23530-201ENSMUST00000104564 137 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm13329-201ENSMUST00000117063 265 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm12878-201ENSMUST00000118744 332 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm11359-201ENSMUST00000120039 567 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm25807-201ENSMUST00000122783 305 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm23470-201ENSMUST00000157129 120 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm15946-201ENSMUST00000160654 423 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm29413-201ENSMUST00000186019 880 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm29639-201ENSMUST00000188375 580 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms