Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm28412-201ENSMUST00000187243 177 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm5268-201ENSMUST00000189212 940 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm29553-201ENSMUST00000189692 279 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm23128-202ENSMUST00000196578 133 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm43991-201ENSMUST00000203751 274 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm9973-202ENSMUST00000220926 166 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.61□□□□□ -1.99
Upk3aQ9JKX8 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm15110-201ENSMUST00000117545 881 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm16171-201ENSMUST00000118004 324 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm13454-201ENSMUST00000118166 483 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm15936-201ENSMUST00000118706 460 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm15452-201ENSMUST00000119877 240 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm14713-201ENSMUST00000122362 686 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm27330-201ENSMUST00000184689 132 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm7858-201ENSMUST00000190177 622 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm44476-201ENSMUST00000196225 91 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm44399-201ENSMUST00000205043 226 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm29754-201ENSMUST00000206269 358 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm46103-201ENSMUST00000217614 341 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Upk3aQ9JKX8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm25376-201ENSMUST00000104340 133 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm12156-201ENSMUST00000119188 554 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm13627-201ENSMUST00000119700 706 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm14877-201ENSMUST00000119803 478 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm14915-201ENSMUST00000120747 204 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm11321-201ENSMUST00000121257 902 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm24532-201ENSMUST00000157951 286 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm23032-201ENSMUST00000157995 107 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm20415-201ENSMUST00000172877 423 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm24019-201ENSMUST00000178620 107 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm26243-201ENSMUST00000179260 107 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm27505-201ENSMUST00000185071 110 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm23296-201ENSMUST00000082555 107 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Gm24859-201ENSMUST00000082729 107 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.59□□□□□ -1.99
Upk3aQ9JKX8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Upk3aQ9JKX8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Upk3aQ9JKX8 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upk3aQ9JKX8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm25213-201ENSMUST00000102388 113 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm25168-201ENSMUST00000104189 132 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm9850-201ENSMUST00000117916 227 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm13640-201ENSMUST00000118445 264 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm7327-201ENSMUST00000120925 652 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm11582-201ENSMUST00000121041 236 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm12095-201ENSMUST00000121962 816 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm12368-201ENSMUST00000122251 434 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm13424-201ENSMUST00000122301 354 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Upk3aQ9JKX8 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm22651-201ENSMUST00000157872 94 ntBASIC2.58□□□□□ -2
Upk3aQ9JKX8 Gm25373-201ENSMUST00000158156 115 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms