Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm25728-201ENSMUST00000104525 159 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm14931-201ENSMUST00000111079 253 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm14517-201ENSMUST00000119040 337 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm23754-201ENSMUST00000157576 63 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm17154-201ENSMUST00000165748 431 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Mir3112-201ENSMUST00000175431 82 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Mir8090-201ENSMUST00000185078 136 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm8392-201ENSMUST00000185647 835 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm1833-201ENSMUST00000191608 682 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm43659-201ENSMUST00000200894 628 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm24890-201ENSMUST00000104389 102 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm12891-201ENSMUST00000119358 240 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm5646-201ENSMUST00000120568 714 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm5958-201ENSMUST00000147698 297 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm23895-201ENSMUST00000158108 160 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Mir7013-201ENSMUST00000183540 72 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm9632-201ENSMUST00000195934 643 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn5aQ9JJV9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Mir693-201ENSMUST00000102187 89 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm6664-201ENSMUST00000119138 468 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm12639-201ENSMUST00000121400 493 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm29073-201ENSMUST00000185563 664 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm29165-201ENSMUST00000190655 664 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm29211-201ENSMUST00000191470 664 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Mir378a-201ENSMUST00000198300 66 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm45742-201ENSMUST00000212400 433 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm7753-201ENSMUST00000221007 867 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm5374-201ENSMUST00000222868 657 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.74□□□□□ -1.97
Scn5aQ9JJV9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm6913-201ENSMUST00000100019 348 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Mir682-201ENSMUST00000102281 96 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm11693-201ENSMUST00000119625 565 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm22521-201ENSMUST00000158272 134 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm27428-201ENSMUST00000184289 110 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm17929-201ENSMUST00000186851 627 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm28925-201ENSMUST00000188586 168 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm5268-201ENSMUST00000189212 940 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm28155-201ENSMUST00000191066 151 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm43115-201ENSMUST00000196244 160 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm42465-201ENSMUST00000197036 492 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Mir463-201ENSMUST00000093570 75 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm16171-201ENSMUST00000118004 324 ntBASIC2.73□□□□□ -1.97
Scn5aQ9JJV9 Gm11490-201ENSMUST00000118128 272 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms