Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Upf1Q9EPU0 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Gm24577-201ENSMUST00000158580 63 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Gm9022-202ENSMUST00000183285 483 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Gm18551-201ENSMUST00000195594 642 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Gm35702-201ENSMUST00000198653 511 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Upf1Q9EPU0 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Snord98-201ENSMUST00000116819 65 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm11785-201ENSMUST00000120165 601 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm14269-201ENSMUST00000120455 306 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm25325-201ENSMUST00000122559 86 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm22038-201ENSMUST00000157277 242 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm25637-201ENSMUST00000157529 107 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm17072-201ENSMUST00000166673 658 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Mir3103-201ENSMUST00000175474 67 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm24862-201ENSMUST00000179103 79 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm23310-201ENSMUST00000179105 79 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm16378-201ENSMUST00000179168 342 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm25461-201ENSMUST00000179293 79 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm22263-201ENSMUST00000180060 104 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Mir6938-201ENSMUST00000184173 63 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm7182-201ENSMUST00000193351 732 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm18011-201ENSMUST00000203717 565 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm25800-201ENSMUST00000082636 134 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Upf1Q9EPU0 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm25765-201ENSMUST00000104100 132 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm12245-201ENSMUST00000117266 357 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm11982-201ENSMUST00000121480 314 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm11403-201ENSMUST00000122195 369 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Mir5129-201ENSMUST00000174938 78 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm37128-201ENSMUST00000192599 232 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm37881-201ENSMUST00000193001 421 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm44393-201ENSMUST00000197418 138 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm44083-201ENSMUST00000203114 337 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm18540-201ENSMUST00000204025 526 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm33654-201ENSMUST00000221704 215 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm21937-201ENSMUST00000222825 218 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm23412-201ENSMUST00000083017 107 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm25141-201ENSMUST00000083177 107 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm25481-201ENSMUST00000083221 158 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Gm25937-201ENSMUST00000083912 107 ntBASIC4.79□□□□□ -1.64
Upf1Q9EPU0 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms