Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdc40Q9DC48 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm7429-201ENSMUST00000118664 348 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm12706-201ENSMUST00000121588 698 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm24240-201ENSMUST00000157785 135 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Mir3076-201ENSMUST00000175415 60 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm27869-201ENSMUST00000184327 122 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm27330-201ENSMUST00000184689 132 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm18448-201ENSMUST00000186286 599 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm42578-201ENSMUST00000199960 194 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm29920-201ENSMUST00000206876 754 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm18414-201ENSMUST00000210858 694 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm35558-202ENSMUST00000221819 499 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Gm26458-201ENSMUST00000082832 128 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Cdc40Q9DC48 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.51□□□□□ -2.01
Cdc40Q9DC48 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm14879-201ENSMUST00000117308 507 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm11456-201ENSMUST00000121070 256 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm25808-201ENSMUST00000122784 284 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm22794-201ENSMUST00000157228 306 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm25666-201ENSMUST00000157702 107 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm24925-201ENSMUST00000178157 107 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm27342-201ENSMUST00000183530 109 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Mir7242-201ENSMUST00000183710 79 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm27520-201ENSMUST00000184872 81 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm42828-201ENSMUST00000199669 469 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm44657-201ENSMUST00000208568 450 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm10038-201ENSMUST00000077233 441 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cdc40Q9DC48 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Mir542-201ENSMUST00000102186 85 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm24122-201ENSMUST00000104107 132 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm12042-201ENSMUST00000120479 301 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm14841-201ENSMUST00000121067 758 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm14411-201ENSMUST00000121798 914 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm25945-201ENSMUST00000122484 135 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm22651-201ENSMUST00000157872 94 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Snord53-201ENSMUST00000175146 78 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Mir3103-201ENSMUST00000175474 67 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm20718-201ENSMUST00000176058 259 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Mir6338-201ENSMUST00000183389 109 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Mir6402-201ENSMUST00000183406 80 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm27470-201ENSMUST00000184070 210 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm18692-201ENSMUST00000193047 511 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm44526-201ENSMUST00000204664 121 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm2436-201ENSMUST00000219562 774 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm31849-201ENSMUST00000220306 375 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm25199-201ENSMUST00000083095 104 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm25008-201ENSMUST00000083809 81 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.49□□□□□ -2.01
Cdc40Q9DC48 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms