Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm12765-201ENSMUST00000117273 615 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm14359-201ENSMUST00000118883 424 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm12053-201ENSMUST00000119022 252 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm12155-201ENSMUST00000121267 160 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm25339-201ENSMUST00000157458 232 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm23906-201ENSMUST00000157573 128 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm28163-201ENSMUST00000187099 325 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm29192-201ENSMUST00000190942 377 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm44391-201ENSMUST00000198490 93 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm5876-201ENSMUST00000203735 243 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm44609-201ENSMUST00000207157 460 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm45105-201ENSMUST00000207824 397 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm46327-201ENSMUST00000218240 365 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Snord42a-201ENSMUST00000082606 65 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm25853-201ENSMUST00000082793 132 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim8Q99PJ2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm22834-201ENSMUST00000102021 79 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm24067-201ENSMUST00000104514 85 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm12787-201ENSMUST00000119234 396 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm15120-201ENSMUST00000120602 301 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm24499-201ENSMUST00000158446 104 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm25671-201ENSMUST00000178612 105 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm23307-201ENSMUST00000179167 105 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm25286-201ENSMUST00000179790 105 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm25156-201ENSMUST00000179809 79 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Mir6338-201ENSMUST00000183389 109 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm37568-201ENSMUST00000191755 364 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm44011-201ENSMUST00000203336 394 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm8132-201ENSMUST00000204938 640 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Gm25581-201ENSMUST00000083410 164 ntBASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim8Q99PJ2 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim8Q99PJ2 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Trim8Q99PJ2 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.09□□□□□ -1.76
Trim8Q99PJ2 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm13664-201ENSMUST00000117304 345 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm23545-201ENSMUST00000158205 104 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm15796-201ENSMUST00000162135 204 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm7925-201ENSMUST00000166690 401 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm8207-201ENSMUST00000171204 502 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm26195-201ENSMUST00000175035 101 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm25198-201ENSMUST00000178574 110 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm27699-201ENSMUST00000183553 180 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Mir6943-201ENSMUST00000185186 66 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm37495-201ENSMUST00000194590 264 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm7093-201ENSMUST00000223004 581 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.08□□□□□ -1.76
Trim8Q99PJ2 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms