Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm44881-201ENSMUST00000205425 367 ntBASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Cspg4Q8VHY0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm44230-201ENSMUST00000203032 3550 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm22565-201ENSMUST00000175540 69 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm19193-201ENSMUST00000190263 590 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm44358-201ENSMUST00000196301 98 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm44548-201ENSMUST00000208929 192 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Mir221-201ENSMUST00000083488 95 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm22866-201ENSMUST00000083947 177 ntBASIC1.53□□□□□ -2.16
Cspg4Q8VHY0 Gm9009-201ENSMUST00000117321 326 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Gm25051-201ENSMUST00000158602 249 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 AC116557.1-201ENSMUST00000219494 1521 ntBASIC1.52□□□□□ -2.17
Cspg4Q8VHY0 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm13876-201ENSMUST00000118451 261 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm11248-201ENSMUST00000119568 201 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm14982-201ENSMUST00000121102 442 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm25966-201ENSMUST00000157169 117 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm17872-201ENSMUST00000222550 532 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm22245-201ENSMUST00000082479 103 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Mir878-201ENSMUST00000104680 78 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm6429-201ENSMUST00000117144 475 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm12765-201ENSMUST00000117273 615 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Cspg4Q8VHY0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm25416-201ENSMUST00000104221 107 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm13627-201ENSMUST00000119700 706 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm22698-201ENSMUST00000175375 108 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm24656-201ENSMUST00000177548 132 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm12383-201ENSMUST00000120628 760 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm7209-201ENSMUST00000122339 333 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm22083-201ENSMUST00000157586 102 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Mir7079-201ENSMUST00000184697 69 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm37778-201ENSMUST00000191732 190 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm45034-201ENSMUST00000206831 482 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm6112-201ENSMUST00000208037 629 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm22740-201ENSMUST00000083439 109 ntBASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Cspg4Q8VHY0 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Gm37616-201ENSMUST00000193974 322 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Gm44462-201ENSMUST00000199696 129 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Gm43224-201ENSMUST00000201567 898 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Gm45063-201ENSMUST00000203726 472 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Gm5322-201ENSMUST00000206142 699 ntBASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.49□□□□□ -2.17
Cspg4Q8VHY0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms