Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7204-201ENSMUST00000062591 600 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Gm21286-201ENSMUST00000098035 545 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc9Q8VC31 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Mir759-201ENSMUST00000103254 98 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm9009-201ENSMUST00000117321 326 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm11577-201ENSMUST00000118030 737 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm22675-201ENSMUST00000158430 104 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm22398-201ENSMUST00000174941 125 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm25731-201ENSMUST00000175167 125 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm28552-201ENSMUST00000190725 388 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm43652-201ENSMUST00000196219 675 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm44818-201ENSMUST00000206608 358 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm45366-201ENSMUST00000209828 384 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 AC154328.1-201ENSMUST00000225875 307 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm24626-201ENSMUST00000082621 161 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Gm25793-201ENSMUST00000083287 107 ntBASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ccdc9Q8VC31 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm24281-201ENSMUST00000104234 136 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm25316-201ENSMUST00000116826 118 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm13349-201ENSMUST00000118436 411 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm12016-201ENSMUST00000119079 681 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm13210-201ENSMUST00000121483 273 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm15065-201ENSMUST00000121699 273 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm25104-201ENSMUST00000122476 163 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm24961-201ENSMUST00000157918 184 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm26426-201ENSMUST00000177866 123 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm26060-201ENSMUST00000180094 123 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm43368-201ENSMUST00000200638 409 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm44030-201ENSMUST00000204865 432 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Ear14-201ENSMUST00000049559 468 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm25141-201ENSMUST00000083177 107 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm38211-201ENSMUST00000192814 7217 ntBASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc9Q8VC31 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Gm37158-201ENSMUST00000191652 5704 ntBASIC4.15□□□□□ -1.74
Ccdc9Q8VC31 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm14753-201ENSMUST00000118503 246 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm15313-201ENSMUST00000119179 282 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm22204-201ENSMUST00000122654 327 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm23032-201ENSMUST00000157995 107 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm22534-201ENSMUST00000158173 104 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 AC122484.1-201ENSMUST00000221578 177 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Ccdc9Q8VC31 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm24951-201ENSMUST00000102182 109 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms