Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ushbp1Q8R370 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm13711-201ENSMUST00000119708 453 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm6625-201ENSMUST00000177870 272 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm38088-201ENSMUST00000195829 241 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm18429-201ENSMUST00000198707 421 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm43406-201ENSMUST00000200356 334 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm45438-201ENSMUST00000210242 564 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm17990-201ENSMUST00000211728 553 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm25481-201ENSMUST00000083221 158 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm25755-201ENSMUST00000083396 107 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.3□□□□□ -1.72
Ushbp1Q8R370 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm14681-201ENSMUST00000118047 411 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm11693-201ENSMUST00000119625 565 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm14883-201ENSMUST00000120179 157 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm22219-201ENSMUST00000157562 319 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm24784-201ENSMUST00000157640 62 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm22534-201ENSMUST00000158173 104 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm26189-201ENSMUST00000179879 107 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm11395-201ENSMUST00000181011 499 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm6651-201ENSMUST00000189471 271 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm33354-201ENSMUST00000195448 906 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm44099-201ENSMUST00000203299 112 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm44016-201ENSMUST00000203463 164 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm44609-201ENSMUST00000207157 460 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm45375-201ENSMUST00000210338 280 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm23736-201ENSMUST00000082553 75 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm23848-201ENSMUST00000083826 106 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ushbp1Q8R370 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.29□□□□□ -1.72
Ushbp1Q8R370 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm15268-201ENSMUST00000118845 352 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm12640-201ENSMUST00000120097 310 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm14765-201ENSMUST00000121954 326 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm26476-201ENSMUST00000122618 313 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm6058-201ENSMUST00000154261 399 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm22320-201ENSMUST00000157149 312 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm22840-201ENSMUST00000158444 136 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Mir7014-201ENSMUST00000183853 63 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm27189-201ENSMUST00000184119 190 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Mir6363-201ENSMUST00000184880 114 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm28781-201ENSMUST00000185760 696 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm29307-201ENSMUST00000187367 696 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm29339-201ENSMUST00000189613 696 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm29407-201ENSMUST00000191468 696 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm37568-201ENSMUST00000191755 364 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm18956-201ENSMUST00000192857 480 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm43083-201ENSMUST00000199594 476 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm18540-201ENSMUST00000204025 526 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm19126-201ENSMUST00000207896 509 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms