Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm20794-201ENSMUST00000177626 628 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Mir6715-201ENSMUST00000184990 57 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm42758-201ENSMUST00000202146 283 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm45420-201ENSMUST00000211243 425 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Gm7984-201ENSMUST00000060640 538 ntBASIC4.24□□□□□ -1.73
Vps53Q8CCB4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Vps53Q8CCB4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm22834-201ENSMUST00000102021 79 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm12509-201ENSMUST00000118033 609 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm12294-201ENSMUST00000119723 490 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm11704-201ENSMUST00000120031 214 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm14804-201ENSMUST00000122322 508 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm22036-201ENSMUST00000157279 215 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Mir1934-201ENSMUST00000158127 83 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm28155-201ENSMUST00000191066 151 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm29848-201ENSMUST00000203107 295 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm5955-201ENSMUST00000222712 219 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Vps53Q8CCB4 Gm12568-201ENSMUST00000117362 624 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm17183-201ENSMUST00000171170 493 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm24810-201ENSMUST00000175317 70 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm25535-201ENSMUST00000175364 125 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm27332-201ENSMUST00000184893 112 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm19649-201ENSMUST00000201126 822 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm32381-201ENSMUST00000203192 476 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm18903-201ENSMUST00000215343 480 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm7540-201ENSMUST00000219764 926 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm22739-201ENSMUST00000083437 160 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Vps53Q8CCB4 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.21□□□□□ -1.73
Vps53Q8CCB4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Vps53Q8CCB4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Vps53Q8CCB4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Vps53Q8CCB4 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Vps53Q8CCB4 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
Vps53Q8CCB4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Mir667-201ENSMUST00000102441 92 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm9043-201ENSMUST00000119677 314 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm23463-201ENSMUST00000122468 99 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm23312-201ENSMUST00000158774 102 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm28724-201ENSMUST00000186149 625 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm29134-201ENSMUST00000186579 126 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm28241-201ENSMUST00000190916 235 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm5829-201ENSMUST00000191383 351 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm38050-201ENSMUST00000191904 238 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm43083-201ENSMUST00000199594 476 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm44355-201ENSMUST00000200417 104 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm44824-201ENSMUST00000207021 229 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm45105-201ENSMUST00000207824 397 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm7675-201ENSMUST00000208828 686 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Gm4017-201ENSMUST00000084813 338 ntBASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Vps53Q8CCB4 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Vps53Q8CCB4 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.2□□□□□ -1.74
Vps53Q8CCB4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Vps53Q8CCB4 Gm26396-201ENSMUST00000104093 132 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms