Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Mir215-201ENSMUST00000083628 112 ntBASIC4.9□□□□□ -1.63
Trim56Q80VI1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim56Q80VI1 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trim56Q80VI1 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm23273-201ENSMUST00000104058 135 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm15526-201ENSMUST00000112504 204 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm11367-201ENSMUST00000117802 120 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm12771-201ENSMUST00000120246 135 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm12779-201ENSMUST00000121496 143 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm22257-201ENSMUST00000158687 301 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm17072-201ENSMUST00000166673 658 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Mir6996-201ENSMUST00000183922 61 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Mir6933-201ENSMUST00000184982 81 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm6651-201ENSMUST00000189471 271 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm7381-201ENSMUST00000098958 300 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.89□□□□□ -1.63
Trim56Q80VI1 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim56Q80VI1 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm22493-201ENSMUST00000104494 132 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm13268-201ENSMUST00000117485 433 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm25177-201ENSMUST00000122634 117 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm25956-201ENSMUST00000175115 217 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm23215-201ENSMUST00000178153 121 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm44059-201ENSMUST00000204048 351 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm19908-201ENSMUST00000204684 391 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm18453-201ENSMUST00000208000 626 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm45101-201ENSMUST00000208327 232 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm45772-201ENSMUST00000212961 240 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm26225-201ENSMUST00000082508 135 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim56Q80VI1 Neat1-201ENSMUST00000173672 20771 ntBASIC4.88□□□□□ -1.63
Trim56Q80VI1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Mir701-201ENSMUST00000102208 109 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm22488-201ENSMUST00000116811 127 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm13567-201ENSMUST00000118026 247 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm13901-201ENSMUST00000137252 468 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm26149-201ENSMUST00000157432 108 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm24664-201ENSMUST00000158939 100 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm17162-201ENSMUST00000168538 473 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm22398-201ENSMUST00000174941 125 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm25731-201ENSMUST00000175167 125 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm25999-201ENSMUST00000175398 133 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Snora15-201ENSMUST00000177461 131 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm23864-201ENSMUST00000177607 107 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Gm4761-201ENSMUST00000178086 582 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.87□□□□□ -1.63
Trim56Q80VI1 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim56Q80VI1 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms