Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.3□□□□□ -1.88
Hmgb4Q6P8W9 Gm23615-201ENSMUST00000082602 65 ntBASIC3.3□□□□□ -1.88
Hmgb4Q6P8W9 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb4Q6P8W9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb4Q6P8W9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb4Q6P8W9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm12492-201ENSMUST00000117665 564 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm14594-201ENSMUST00000118052 537 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm8858-201ENSMUST00000118259 342 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm14590-201ENSMUST00000118934 537 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm15112-201ENSMUST00000120152 860 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm24190-201ENSMUST00000157976 216 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Mir3964-201ENSMUST00000174898 74 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm26189-201ENSMUST00000179879 107 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm14596-201ENSMUST00000180268 537 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm14595-201ENSMUST00000180335 537 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Mir7081-201ENSMUST00000184490 75 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Mir6372-201ENSMUST00000185114 109 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm28282-201ENSMUST00000186072 186 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm5268-201ENSMUST00000189212 940 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm45049-201ENSMUST00000207586 591 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm18160-201ENSMUST00000214279 827 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm22810-201ENSMUST00000082741 158 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb4Q6P8W9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm25876-201ENSMUST00000104329 119 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm7071-201ENSMUST00000120458 462 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm25706-201ENSMUST00000157828 247 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm22076-201ENSMUST00000158601 84 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm25670-201ENSMUST00000178423 107 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm26239-201ENSMUST00000178842 107 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm4076-201ENSMUST00000179230 965 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm25156-201ENSMUST00000179809 79 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm24267-201ENSMUST00000179841 107 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm11392-201ENSMUST00000181419 710 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm37081-201ENSMUST00000192034 196 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm44295-201ENSMUST00000203805 437 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm19126-201ENSMUST00000207896 509 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm3442-201ENSMUST00000216808 710 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm24292-201ENSMUST00000082888 107 ntBASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb4Q6P8W9 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.28□□□□□ -1.89
Hmgb4Q6P8W9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm26423-201ENSMUST00000104277 128 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm11813-201ENSMUST00000118586 291 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm12825-201ENSMUST00000120249 563 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm13406-201ENSMUST00000121991 256 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm12045-201ENSMUST00000122122 573 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm25294-201ENSMUST00000122791 104 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm17119-201ENSMUST00000163943 280 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm20534-201ENSMUST00000172957 172 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm22716-201ENSMUST00000177596 107 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms