Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm14736-201ENSMUST00000121470 336 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm14810-201ENSMUST00000121628 486 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm22136-201ENSMUST00000158751 268 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm16490-201ENSMUST00000165299 351 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm20656-201ENSMUST00000176925 518 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm23648-201ENSMUST00000180301 107 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm27402-201ENSMUST00000183890 120 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm10105-201ENSMUST00000184601 270 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm27385-201ENSMUST00000184747 104 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm18505-201ENSMUST00000187360 790 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm20923-201ENSMUST00000190009 319 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm7858-201ENSMUST00000190177 622 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm19202-201ENSMUST00000198096 808 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm44870-201ENSMUST00000207291 357 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm8785-201ENSMUST00000220259 487 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm4987-201ENSMUST00000078326 408 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm23506-201ENSMUST00000083077 107 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Trim28Q62318 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim28Q62318 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.59□□□□□ -1.68
Trim28Q62318 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.59□□□□□ -1.68
Trim28Q62318 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Trim28Q62318 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim28Q62318 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim28Q62318 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim28Q62318 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim28Q62318 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm23988-201ENSMUST00000117034 122 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm14364-201ENSMUST00000129209 267 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm26001-201ENSMUST00000157989 103 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm24664-201ENSMUST00000158939 100 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm22910-201ENSMUST00000178568 132 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm28598-201ENSMUST00000186490 615 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm29268-201ENSMUST00000188669 615 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm28951-201ENSMUST00000190742 313 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm29218-205ENSMUST00000190846 615 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm28978-201ENSMUST00000191120 615 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm36964-201ENSMUST00000191876 198 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm37172-201ENSMUST00000191926 615 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm37455-201ENSMUST00000191993 529 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.58□□□□□ -1.68
Trim28Q62318 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm43723-201ENSMUST00000196886 189 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm42539-201ENSMUST00000197009 308 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm2676-201ENSMUST00000207279 606 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim28Q62318 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.58□□□□□ -1.68
Trim28Q62318 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim28Q62318 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim28Q62318 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim28Q62318 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim28Q62318 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim28Q62318 Gm24544-201ENSMUST00000103862 110 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm23532-201ENSMUST00000104569 112 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm13155-201ENSMUST00000119277 646 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm14926-201ENSMUST00000120650 508 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm8178-201ENSMUST00000121570 646 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm14581-201ENSMUST00000121726 198 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm25827-201ENSMUST00000157089 107 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm22791-201ENSMUST00000157232 145 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm24537-201ENSMUST00000157950 102 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm22765-201ENSMUST00000158371 128 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm3470-201ENSMUST00000160819 420 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Snord92-201ENSMUST00000175548 85 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim28Q62318 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.57□□□□□ -1.68
Trim28Q62318 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim28Q62318 Gm5731-201ENSMUST00000190969 481 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm43142-201ENSMUST00000198670 361 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm44125-201ENSMUST00000203068 448 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim28Q62318 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Gm9309-201ENSMUST00000223537 546 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.57□□□□□ -1.68
Trim28Q62318 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms