Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm14296-202ENSMUST00000108931 750 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm14656-201ENSMUST00000120342 502 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm6265-201ENSMUST00000149263 231 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm25643-201ENSMUST00000158874 103 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm29704-201ENSMUST00000196011 253 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Ear-ps9-202ENSMUST00000226796 245 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf1Q5U4C3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm38265-201ENSMUST00000193479 3766 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Mir761-201ENSMUST00000103245 76 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm14541-201ENSMUST00000118985 157 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm24839-201ENSMUST00000122602 107 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm25902-201ENSMUST00000158493 318 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm38332-201ENSMUST00000194189 147 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm9402-201ENSMUST00000196849 388 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm4734-201ENSMUST00000200117 777 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm44261-201ENSMUST00000203337 209 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm44513-201ENSMUST00000206811 439 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm45209-201ENSMUST00000207122 353 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 AC158606.1-201ENSMUST00000220078 325 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm45815-201ENSMUST00000220241 146 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Snora23-201ENSMUST00000082517 184 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm38253-201ENSMUST00000194058 4678 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Gm37792-201ENSMUST00000195761 3413 ntBASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf1Q5U4C3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Mir294-201ENSMUST00000104710 84 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm14688-201ENSMUST00000119169 303 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm13725-201ENSMUST00000122139 207 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm26414-201ENSMUST00000157674 269 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm22536-201ENSMUST00000158171 134 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm22611-201ENSMUST00000158288 150 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Mir6335-201ENSMUST00000184081 98 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Mir6933-201ENSMUST00000184982 81 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Gm5372-201ENSMUST00000187540 409 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC6.17□□□□□ -1.42
Scaf1Q5U4C3 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm14628-201ENSMUST00000117508 635 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm15058-201ENSMUST00000117689 458 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Mir6355-201ENSMUST00000183687 106 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm27521-201ENSMUST00000184022 64 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm8242-202ENSMUST00000193056 475 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm45403-201ENSMUST00000209453 276 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Gm23875-201ENSMUST00000083711 318 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Scaf1Q5U4C3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm11935-201ENSMUST00000118608 399 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm12815-201ENSMUST00000121737 135 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm12693-201ENSMUST00000121965 483 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm22098-201ENSMUST00000157930 85 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm22113-201ENSMUST00000158343 104 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm25264-201ENSMUST00000158519 117 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm17065-201ENSMUST00000165245 239 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm29668-201ENSMUST00000187802 315 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm37659-201ENSMUST00000194574 111 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm37601-201ENSMUST00000194922 394 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 AC158395.1-201ENSMUST00000227206 452 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 AC154738.5-201ENSMUST00000227397 310 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Mir346-201ENSMUST00000083547 98 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Gm23845-201ENSMUST00000083834 152 ntBASIC6.15□□□□□ -1.42
Scaf1Q5U4C3 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Scaf1Q5U4C3 Gm42659-201ENSMUST00000196955 1754 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms