Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm22186-201ENSMUST00000157822 122 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm29600-201ENSMUST00000188687 377 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm45049-201ENSMUST00000207586 591 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Mir101b-201ENSMUST00000083622 97 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav3-3Q5R1C3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm26075-201ENSMUST00000104062 121 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm14594-201ENSMUST00000118052 537 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm14590-201ENSMUST00000118934 537 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm14901-201ENSMUST00000119001 283 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm12016-201ENSMUST00000119079 681 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm26254-201ENSMUST00000122491 118 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm22722-201ENSMUST00000157467 132 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm22833-201ENSMUST00000158292 132 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Mir5099-201ENSMUST00000175257 74 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Mir3066-201ENSMUST00000175296 83 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm20673-201ENSMUST00000177167 430 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm24100-201ENSMUST00000178592 79 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm26297-201ENSMUST00000179464 132 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm14596-201ENSMUST00000180268 537 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm14595-201ENSMUST00000180335 537 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm44391-201ENSMUST00000198490 93 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm17893-201ENSMUST00000203017 770 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav3-3Q5R1C3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Trav3-3Q5R1C3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm23609-201ENSMUST00000104542 127 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm13349-201ENSMUST00000118436 411 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm6664-201ENSMUST00000119138 468 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm15113-201ENSMUST00000119280 836 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm15190-201ENSMUST00000120855 276 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm11829-201ENSMUST00000121003 282 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm23032-201ENSMUST00000157995 107 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm25835-201ENSMUST00000158917 144 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm26189-201ENSMUST00000179879 107 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm27783-201ENSMUST00000183534 105 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm38231-201ENSMUST00000192030 347 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm5983-201ENSMUST00000197739 770 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm44295-201ENSMUST00000203805 437 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-3Q5R1C3 Gm6369-201ENSMUST00000069626 412 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms