Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm44720-201ENSMUST00000206076 260 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm19709-201ENSMUST00000215403 482 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Gm35558-202ENSMUST00000221819 499 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.57□□□□□ -2
Trav8d-2Q5R1B6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm23951-201ENSMUST00000104029 132 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm13329-201ENSMUST00000117063 265 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm2005-201ENSMUST00000120759 542 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm13555-201ENSMUST00000121668 319 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm14129-201ENSMUST00000122436 291 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm23886-201ENSMUST00000122684 313 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm24876-201ENSMUST00000158780 92 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm28637-201ENSMUST00000179424 345 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm26585-201ENSMUST00000180890 630 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm27399-201ENSMUST00000184250 78 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm19641-201ENSMUST00000188432 417 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm9377-201ENSMUST00000207227 623 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav8d-2Q5R1B6 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm23691-201ENSMUST00000101878 107 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm11356-201ENSMUST00000118974 192 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm25666-201ENSMUST00000157702 107 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm16569-201ENSMUST00000160526 314 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm17183-201ENSMUST00000171170 493 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm27428-201ENSMUST00000184289 110 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm38231-201ENSMUST00000192030 347 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm37213-201ENSMUST00000193077 586 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm43804-201ENSMUST00000198280 456 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm17838-201ENSMUST00000205872 876 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm4921-201ENSMUST00000219804 992 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Gm23738-201ENSMUST00000082828 171 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav8d-2Q5R1B6 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm11268-201ENSMUST00000118347 267 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm14469-201ENSMUST00000118363 202 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm12878-201ENSMUST00000118744 332 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm14669-201ENSMUST00000118841 250 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm14989-201ENSMUST00000120497 207 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm14848-201ENSMUST00000121850 467 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm25107-201ENSMUST00000122472 129 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm22225-201ENSMUST00000157358 278 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm22264-201ENSMUST00000178200 107 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm6651-201ENSMUST00000189471 271 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Mir703-201ENSMUST00000197105 109 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Gm42958-201ENSMUST00000197595 318 ntBASIC2.54□□□□□ -2
Trav8d-2Q5R1B6 Mir6925-201ENSMUST00000197857 70 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms