Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm42828-201ENSMUST00000199669 469 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm15235-201ENSMUST00000200572 194 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm45614-201ENSMUST00000209994 721 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.57□□□□□ -2
Upf3bQ3ULL6 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.57□□□□□ -2
Upf3bQ3ULL6 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm23803-201ENSMUST00000104610 132 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm14566-201ENSMUST00000118915 321 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm13862-201ENSMUST00000121220 197 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm14775-201ENSMUST00000122089 310 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm12368-201ENSMUST00000122251 434 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm12443-201ENSMUST00000122308 323 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm14129-201ENSMUST00000122436 291 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm27599-201ENSMUST00000183758 174 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm27470-201ENSMUST00000184070 210 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm27869-201ENSMUST00000184327 122 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm6651-201ENSMUST00000189471 271 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.56□□□□□ -2
Upf3bQ3ULL6 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm44720-201ENSMUST00000206076 260 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Olfr815-201ENSMUST00000071557 951 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm22005-201ENSMUST00000082795 141 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Gm23932-201ENSMUST00000082914 107 ntBASIC2.56□□□□□ -2
Upf3bQ3ULL6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm13087-201ENSMUST00000118298 256 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm12876-201ENSMUST00000120975 408 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm24210-201ENSMUST00000158263 133 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm28744-201ENSMUST00000189939 340 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm7858-201ENSMUST00000190177 622 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm29389-201ENSMUST00000191562 352 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm44657-201ENSMUST00000208568 450 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Gm10780-201ENSMUST00000099459 285 ntBASIC2.55□□□□□ -2
Upf3bQ3ULL6 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Upf3bQ3ULL6 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm14125-201ENSMUST00000113442 680 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm24075-201ENSMUST00000158175 72 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm22500-201ENSMUST00000158982 99 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm8580-201ENSMUST00000160295 464 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm27520-201ENSMUST00000184872 81 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm37081-201ENSMUST00000192034 196 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm44754-201ENSMUST00000208155 400 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3bQ3ULL6 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3bQ3ULL6 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm4945-201ENSMUST00000075152 453 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.54□□□□□ -2
Upf3bQ3ULL6 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm24068-201ENSMUST00000104513 132 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.53□□□□□ -2
Upf3bQ3ULL6 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.53□□□□□ -2
Upf3bQ3ULL6 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm24552-201ENSMUST00000158646 103 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm8676-201ENSMUST00000184206 637 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Mir6372-201ENSMUST00000185114 109 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm29045-201ENSMUST00000187278 698 ntBASIC2.53□□□□□ -2
Upf3bQ3ULL6 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms