Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.33□□□□□ -1.56
Col17a1Q07563 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col17a1Q07563 Gm15936-201ENSMUST00000118706 460 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm6664-201ENSMUST00000119138 468 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm14804-201ENSMUST00000122322 508 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm24976-201ENSMUST00000158972 135 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm28951-201ENSMUST00000190742 313 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm37746-201ENSMUST00000193249 198 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm45498-201ENSMUST00000210346 283 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 AC159188.1-201ENSMUST00000225198 526 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col17a1Q07563 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm11881-201ENSMUST00000119408 572 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm14333-201ENSMUST00000130484 264 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm23545-201ENSMUST00000158205 104 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm23350-201ENSMUST00000158429 103 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm23473-201ENSMUST00000158883 116 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm17054-201ENSMUST00000169811 259 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Mir3470b-201ENSMUST00000175563 126 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm27402-201ENSMUST00000183890 120 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm29147-201ENSMUST00000186846 315 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm28160-201ENSMUST00000191229 315 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm6012-201ENSMUST00000210821 730 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col17a1Q07563 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.31□□□□□ -1.56
Col17a1Q07563 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm14867-201ENSMUST00000120156 866 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm25335-201ENSMUST00000158043 103 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm22839-201ENSMUST00000158436 304 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm24675-201ENSMUST00000158757 259 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col17a1Q07563 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm23864-201ENSMUST00000177607 107 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Mir3569-201ENSMUST00000185080 58 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm8041-201ENSMUST00000199755 616 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm18327-201ENSMUST00000202426 830 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.31□□□□□ -1.56
Col17a1Q07563 Gm45710-201ENSMUST00000212847 215 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.31□□□□□ -1.56
Col17a1Q07563 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col17a1Q07563 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Col17a1Q07563 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col17a1Q07563 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Col17a1Q07563 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col17a1Q07563 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm13664-201ENSMUST00000117304 345 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm13349-201ENSMUST00000118436 411 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm8292-201ENSMUST00000162574 396 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Mir6411-201ENSMUST00000183556 108 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Mir6413-201ENSMUST00000184049 108 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm17946-201ENSMUST00000186856 538 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm39147-201ENSMUST00000211376 465 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col17a1Q07563 AC167669.1-201ENSMUST00000224932 384 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm23452-201ENSMUST00000083327 107 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Gm24917-201ENSMUST00000083935 104 ntBASIC5.3□□□□□ -1.56
Col17a1Q07563 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Col17a1Q07563 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col17a1Q07563 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col17a1Q07563 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm24274-201ENSMUST00000116787 124 ntBASIC5.29□□□□□ -1.56
Col17a1Q07563 Gm12261-201ENSMUST00000117499 645 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms