Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25520-201ENSMUST00000158389 118 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm24676-201ENSMUST00000158758 75 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm17020-201ENSMUST00000172274 274 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm20039-201ENSMUST00000210329 394 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm45392-201ENSMUST00000210441 214 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col8a1Q00780 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.82□□□□□ -1.8
Col8a1Q00780 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col8a1Q00780 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.82□□□□□ -1.8
Col8a1Q00780 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm42583-201ENSMUST00000202678 6700 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm15195-201ENSMUST00000118775 263 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm12897-201ENSMUST00000120341 250 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm13153-201ENSMUST00000120969 637 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm22958-201ENSMUST00000122512 184 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm25883-201ENSMUST00000157781 271 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm25920-201ENSMUST00000158307 99 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm44354-201ENSMUST00000196017 143 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm45815-201ENSMUST00000220241 146 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Gm42910-201ENSMUST00000198917 2921 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.81□□□□□ -1.8
Col8a1Q00780 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.81□□□□□ -1.8
Col8a1Q00780 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col8a1Q00780 Ankrd28-204ENSMUST00000227089 3522 ntBASIC3.81□□□□□ -1.8
Col8a1Q00780 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm23422-201ENSMUST00000102000 107 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm23705-201ENSMUST00000104370 130 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Snora64-201ENSMUST00000104521 134 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm9003-201ENSMUST00000121810 482 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm25966-201ENSMUST00000157169 117 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm25624-201ENSMUST00000157222 275 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Mir3058-201ENSMUST00000175126 91 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm22243-201ENSMUST00000178754 120 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm25235-201ENSMUST00000179933 107 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm27851-201ENSMUST00000183529 63 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Mir6336-201ENSMUST00000183581 130 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm6112-201ENSMUST00000208037 629 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm45367-201ENSMUST00000210171 347 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC3.8□□□□□ -1.8
Col8a1Q00780 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Mir452-201ENSMUST00000093629 85 ntBASIC3.8□□□□□ -1.8
Col8a1Q00780 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col8a1Q00780 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col8a1Q00780 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms