Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Gm22128-201ENSMUST00000180346 94 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Mir8106-201ENSMUST00000184520 139 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.5□□□□□ -2.01
Ufd1P70362 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ufd1P70362 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.5□□□□□ -2.01
Ufd1P70362 Gm42665-201ENSMUST00000202100 586 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Gm44212-201ENSMUST00000205016 897 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Gm45687-201ENSMUST00000209454 155 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ufd1P70362 Gm10042-201ENSMUST00000079884 78 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Gm25404-201ENSMUST00000082970 107 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ufd1P70362 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.5□□□□□ -2.01
Ufd1P70362 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ufd1P70362 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ufd1P70362 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Ufd1P70362 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm25088-201ENSMUST00000101803 79 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm24430-201ENSMUST00000104077 104 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm22194-201ENSMUST00000116869 95 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm12814-201ENSMUST00000117091 846 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm2066-201ENSMUST00000118046 389 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm12044-201ENSMUST00000120335 213 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm14069-201ENSMUST00000120815 229 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm13406-201ENSMUST00000121991 256 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm24517-201ENSMUST00000122560 107 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm16533-201ENSMUST00000140035 228 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm26088-201ENSMUST00000157896 131 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm27893-201ENSMUST00000184408 194 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm28163-201ENSMUST00000187099 325 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ufd1P70362 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm36966-201ENSMUST00000192217 413 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm37097-201ENSMUST00000193676 336 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Mir129b-201ENSMUST00000197461 65 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm43746-201ENSMUST00000200028 317 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm44295-201ENSMUST00000203805 437 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm44830-201ENSMUST00000207667 584 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm17991-201ENSMUST00000208139 297 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 CT009765.2-201ENSMUST00000221331 392 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ufd1P70362 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ufd1P70362 Mir184-201ENSMUST00000083662 69 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ufd1P70362 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.49□□□□□ -2.01
Ufd1P70362 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ufd1P70362 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.49□□□□□ -2.01
Ufd1P70362 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm22658-201ENSMUST00000104196 155 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm14448-201ENSMUST00000116383 210 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm11576-201ENSMUST00000117433 417 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm12156-201ENSMUST00000119188 554 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm23599-201ENSMUST00000157261 251 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm22560-201ENSMUST00000157332 120 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm24241-201ENSMUST00000157787 145 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm23317-201ENSMUST00000157999 129 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm23895-201ENSMUST00000158108 160 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm22839-201ENSMUST00000158436 304 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm25451-201ENSMUST00000177832 121 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm24137-201ENSMUST00000180055 79 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm22391-201ENSMUST00000180356 79 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.48□□□□□ -2.01
Ufd1P70362 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm28744-201ENSMUST00000189939 340 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Gm43114-201ENSMUST00000198298 343 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ufd1P70362 Gm43232-201ENSMUST00000201346 364 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 AC140344.1-201ENSMUST00000223384 387 ntBASIC2.48□□□□□ -2.01
Ufd1P70362 AC158525.1-201ENSMUST00000223806 576 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms