Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm29211-201ENSMUST00000191470 664 ntBASIC3.34□□□□□ -1.87
NcanP55066 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm45380-201ENSMUST00000210465 315 ntBASIC3.34□□□□□ -1.87
NcanP55066 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.34□□□□□ -1.87
NcanP55066 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.34□□□□□ -1.87
NcanP55066 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.34□□□□□ -1.87
NcanP55066 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.34□□□□□ -1.87
NcanP55066 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.34□□□□□ -1.87
NcanP55066 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NcanP55066 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NcanP55066 Gm22304-201ENSMUST00000082688 129 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm23506-201ENSMUST00000083077 107 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm24610-201ENSMUST00000083270 109 ntBASIC3.34□□□□□ -1.87
NcanP55066 BC051076-202ENSMUST00000199477 2868 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NcanP55066 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.34□□□□□ -1.88
NcanP55066 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NcanP55066 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.33□□□□□ -1.88
NcanP55066 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NcanP55066 Gm14915-201ENSMUST00000120747 204 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.33□□□□□ -1.88
NcanP55066 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 Gm23167-201ENSMUST00000157155 103 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 Gm23269-201ENSMUST00000178701 107 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.33□□□□□ -1.88
NcanP55066 Gm27676-201ENSMUST00000183669 61 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm42805-201ENSMUST00000196158 276 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm18672-201ENSMUST00000208035 270 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.33□□□□□ -1.88
NcanP55066 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.33□□□□□ -1.88
NcanP55066 Gm46194-201ENSMUST00000218136 320 ntBASIC3.33□□□□□ -1.88
NcanP55066 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.33□□□□□ -1.88
NcanP55066 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.33□□□□□ -1.88
NcanP55066 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.33□□□□□ -1.88
NcanP55066 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NcanP55066 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.33□□□□□ -1.88
NcanP55066 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NcanP55066 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NcanP55066 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
NcanP55066 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NcanP55066 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
NcanP55066 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NcanP55066 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NcanP55066 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NcanP55066 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.32□□□□□ -1.88
NcanP55066 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.32□□□□□ -1.88
NcanP55066 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NcanP55066 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm23256-201ENSMUST00000102235 110 ntBASIC3.32□□□□□ -1.88
NcanP55066 Snora36b-201ENSMUST00000104383 132 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm22072-201ENSMUST00000116850 121 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm22091-201ENSMUST00000116908 127 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm14987-201ENSMUST00000117820 676 ntBASIC3.32□□□□□ -1.88
NcanP55066 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm15399-201ENSMUST00000118055 724 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm13155-201ENSMUST00000119277 646 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm8178-201ENSMUST00000121570 646 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.32□□□□□ -1.88
NcanP55066 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.32□□□□□ -1.88
NcanP55066 Gm38076-201ENSMUST00000193889 450 ntBASIC3.32□□□□□ -1.88
NcanP55066 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm44128-201ENSMUST00000204909 219 ntBASIC3.32□□□□□ -1.88
NcanP55066 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.32□□□□□ -1.88
NcanP55066 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NcanP55066 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NcanP55066 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NcanP55066 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NcanP55066 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm24611-201ENSMUST00000083272 107 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm25581-201ENSMUST00000083410 164 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm23733-201ENSMUST00000083750 106 ntBASIC3.32□□□□□ -1.88
NcanP55066 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NcanP55066 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
NcanP55066 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.32□□□□□ -1.88
NcanP55066 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NcanP55066 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NcanP55066 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.31□□□□□ -1.88
NcanP55066 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.31□□□□□ -1.88
NcanP55066 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NcanP55066 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
NcanP55066 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NcanP55066 Mir599-201ENSMUST00000102378 88 ntBASIC3.31□□□□□ -1.88
NcanP55066 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NcanP55066 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NcanP55066 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NcanP55066 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NcanP55066 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NcanP55066 Gm26247-201ENSMUST00000116702 91 ntBASIC3.31□□□□□ -1.88
NcanP55066 Gm14899-201ENSMUST00000118673 548 ntBASIC3.31□□□□□ -1.88
NcanP55066 Gm13273-201ENSMUST00000119737 159 ntBASIC3.31□□□□□ -1.88
NcanP55066 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NcanP55066 Gm24910-201ENSMUST00000157289 272 ntBASIC3.31□□□□□ -1.88
NcanP55066 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NcanP55066 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NcanP55066 Gm20542-201ENSMUST00000174582 372 ntBASIC3.31□□□□□ -1.88
NcanP55066 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms