Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cux1P53564 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Cux1P53564 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Cux1P53564 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm24541-201ENSMUST00000103871 96 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm13487-201ENSMUST00000122240 864 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm15116-201ENSMUST00000122248 663 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm25945-201ENSMUST00000122484 135 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm10074-201ENSMUST00000174543 249 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm22646-201ENSMUST00000175130 115 ntBASIC2.58□□□□□ -2
Cux1P53564 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm27326-201ENSMUST00000183504 95 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm32175-201ENSMUST00000193641 346 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cux1P53564 Gm43431-201ENSMUST00000198577 340 ntBASIC2.58□□□□□ -2
Cux1P53564 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.58□□□□□ -2
Cux1P53564 Gm20039-201ENSMUST00000210329 394 ntBASIC2.58□□□□□ -2
Cux1P53564 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cux1P53564 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cux1P53564 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cux1P53564 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.57□□□□□ -2
Cux1P53564 Gm15115-201ENSMUST00000121145 264 ntBASIC2.57□□□□□ -2
Cux1P53564 Gm22107-201ENSMUST00000122548 100 ntBASIC2.57□□□□□ -2
Cux1P53564 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.57□□□□□ -2
Cux1P53564 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cux1P53564 Gm5967-201ENSMUST00000172723 494 ntBASIC2.57□□□□□ -2
Cux1P53564 Gm24572-201ENSMUST00000175505 88 ntBASIC2.57□□□□□ -2
Cux1P53564 Gm22897-201ENSMUST00000197860 128 ntBASIC2.57□□□□□ -2
Cux1P53564 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cux1P53564 Snord104-201ENSMUST00000083192 70 ntBASIC2.57□□□□□ -2
Cux1P53564 Gm25274-201ENSMUST00000104296 135 ntBASIC2.56□□□□□ -2
Cux1P53564 Gm14791-201ENSMUST00000119061 1166 ntBASIC2.56□□□□□ -2
Cux1P53564 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.56□□□□□ -2
Cux1P53564 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cux1P53564 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.56□□□□□ -2
Cux1P53564 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Cux1P53564 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.56□□□□□ -2
Cux1P53564 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cux1P53564 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cux1P53564 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cux1P53564 Gm13194-201ENSMUST00000142299 311 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cux1P53564 Gm8121-201ENSMUST00000153583 499 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm2878-201ENSMUST00000170173 486 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.55□□□□□ -2
Cux1P53564 Gm23267-201ENSMUST00000178490 132 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm19123-201ENSMUST00000190716 651 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.55□□□□□ -2
Cux1P53564 Gm3010-201ENSMUST00000198805 448 ntBASIC2.55□□□□□ -2
Cux1P53564 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.55□□□□□ -2
Cux1P53564 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cux1P53564 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Cux1P53564 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cux1P53564 Gm24984-201ENSMUST00000104454 133 ntBASIC2.54□□□□□ -2
Cux1P53564 Gm5937-201ENSMUST00000119715 643 ntBASIC2.54□□□□□ -2
Cux1P53564 Gm22345-201ENSMUST00000122644 107 ntBASIC2.54□□□□□ -2
Cux1P53564 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.54□□□□□ -2
Cux1P53564 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.54□□□□□ -2
Cux1P53564 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.54□□□□□ -2
Cux1P53564 Gm26082-201ENSMUST00000104070 127 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm24280-201ENSMUST00000104237 134 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm12448-201ENSMUST00000118852 655 ntBASIC2.53□□□□□ -2
Cux1P53564 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.53□□□□□ -2
Cux1P53564 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm23813-201ENSMUST00000175153 77 ntBASIC2.53□□□□□ -2
Cux1P53564 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cux1P53564 Gm29658-201ENSMUST00000185404 230 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm28650-201ENSMUST00000188413 411 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.53□□□□□ -2
Cux1P53564 Gm37455-201ENSMUST00000191993 529 ntBASIC2.53□□□□□ -2
Cux1P53564 Gm9628-201ENSMUST00000222169 725 ntBASIC2.53□□□□□ -2
Cux1P53564 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cux1P53564 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cux1P53564 Gm27025-201ENSMUST00000182392 942 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm7909-201ENSMUST00000182688 614 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.52□□□□□ -2.01
Cux1P53564 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.52□□□□□ -2.01
Cux1P53564 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Cux1P53564 Gm11483-201ENSMUST00000119839 247 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm6788-201ENSMUST00000166459 270 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm42474-201ENSMUST00000201073 505 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm43911-201ENSMUST00000203097 76 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm45742-201ENSMUST00000212400 433 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Gm46993-201ENSMUST00000220708 259 ntBASIC2.52□□□□□ -2.01
Cux1P53564 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.52□□□□□ -2.01
Cux1P53564 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cux1P53564 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cux1P53564 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.51□□□□□ -2.01
Cux1P53564 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cux1P53564 Gm11344-201ENSMUST00000122011 335 ntBASIC2.51□□□□□ -2.01
Cux1P53564 Gm25051-201ENSMUST00000158602 249 ntBASIC2.51□□□□□ -2.01
Cux1P53564 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.51□□□□□ -2.01
Cux1P53564 Gm36997-201ENSMUST00000195090 707 ntBASIC2.51□□□□□ -2.01
Cux1P53564 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.51□□□□□ -2.01
Cux1P53564 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.51□□□□□ -2.01
Cux1P53564 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cux1P53564 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms