Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm43039-201ENSMUST00000202883 963 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm18602-201ENSMUST00000209794 851 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Gm23518-201ENSMUST00000082835 153 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Mir30e-201ENSMUST00000083475 92 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.13□□□□□ -1.75
Shmt1P50431 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Shmt1P50431 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Shmt1P50431 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Shmt1P50431 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm15994-201ENSMUST00000118029 402 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm12137-201ENSMUST00000119565 346 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm26476-201ENSMUST00000122618 313 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm6956-201ENSMUST00000134724 546 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm25436-201ENSMUST00000158275 145 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm17183-201ENSMUST00000171170 493 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm23365-201ENSMUST00000175019 125 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm25960-201ENSMUST00000175110 125 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm44453-201ENSMUST00000175161 126 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Mir5624-201ENSMUST00000176635 61 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm25195-201ENSMUST00000177656 126 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm8600-201ENSMUST00000186320 905 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm37001-201ENSMUST00000193377 190 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Shmt1P50431 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Shmt1P50431 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.12□□□□□ -1.75
Shmt1P50431 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Shmt1P50431 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Shmt1P50431 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shmt1P50431 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shmt1P50431 Gm25833-201ENSMUST00000104137 133 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm14586-201ENSMUST00000119571 408 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm11982-201ENSMUST00000121480 314 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.11□□□□□ -1.75
Shmt1P50431 Gm24546-201ENSMUST00000158652 102 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm25817-201ENSMUST00000177758 121 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm6625-201ENSMUST00000177870 272 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shmt1P50431 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shmt1P50431 Gm24766-201ENSMUST00000179182 121 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm28399-201ENSMUST00000186221 318 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm28572-201ENSMUST00000187444 318 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm29365-201ENSMUST00000189461 699 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm37603-201ENSMUST00000192368 219 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm38080-201ENSMUST00000194035 268 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm42832-201ENSMUST00000196361 745 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.11□□□□□ -1.75
Shmt1P50431 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm45162-201ENSMUST00000209013 618 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm6303-201ENSMUST00000210123 471 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.11□□□□□ -1.75
Shmt1P50431 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shmt1P50431 Mir28a-201ENSMUST00000083560 86 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shmt1P50431 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Shmt1P50431 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.11□□□□□ -1.75
Shmt1P50431 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Shmt1P50431 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Shmt1P50431 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shmt1P50431 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Shmt1P50431 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Shmt1P50431 Gm22831-201ENSMUST00000102473 109 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm14823-201ENSMUST00000117698 238 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm11582-201ENSMUST00000121041 236 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm11430-201ENSMUST00000121317 217 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm22531-201ENSMUST00000158819 140 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm17159-201ENSMUST00000169043 482 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shmt1P50431 Gm21726-201ENSMUST00000179654 392 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.1□□□□□ -1.75
Shmt1P50431 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shmt1P50431 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms