Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm44611-201ENSMUST00000207507 355 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm46136-201ENSMUST00000214730 565 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm22265-201ENSMUST00000082947 116 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Gm16261-201ENSMUST00000096813 205 ntBASIC2.29□□□□□ -2.04
Sdc1P18828 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Sdc1P18828 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc1P18828 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sdc1P18828 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Sdc1P18828 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc1P18828 Gm13343-201ENSMUST00000116474 105 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm22789-201ENSMUST00000157884 130 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm3102-201ENSMUST00000164236 489 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Snord93-201ENSMUST00000175580 71 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm22131-201ENSMUST00000178415 94 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm21758-201ENSMUST00000179336 819 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm25873-201ENSMUST00000180317 107 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm29647-201ENSMUST00000188795 666 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm20832-201ENSMUST00000189076 665 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm19224-201ENSMUST00000190477 793 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm28241-201ENSMUST00000190916 235 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm28504-201ENSMUST00000190977 666 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm31511-201ENSMUST00000193134 657 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm35843-201ENSMUST00000193716 666 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.28□□□□□ -2.04
Sdc1P18828 Gm30638-201ENSMUST00000195570 656 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm36728-201ENSMUST00000195782 665 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.28□□□□□ -2.04
Sdc1P18828 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc1P18828 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc1P18828 Gm45048-201ENSMUST00000207058 429 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.28□□□□□ -2.04
Sdc1P18828 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sdc1P18828 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc1P18828 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm2544-201ENSMUST00000222702 756 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.28□□□□□ -2.04
Sdc1P18828 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sdc1P18828 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sdc1P18828 Snora7a-201ENSMUST00000082629 140 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm24610-201ENSMUST00000083270 109 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm23264-201ENSMUST00000083372 107 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm25755-201ENSMUST00000083396 107 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Sdc1P18828 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.28□□□□□ -2.04
Sdc1P18828 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Sdc1P18828 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
Sdc1P18828 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
Sdc1P18828 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc1P18828 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Sdc1P18828 Snora36b-201ENSMUST00000104383 132 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm13803-201ENSMUST00000117547 489 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm11784-201ENSMUST00000118568 474 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm8217-201ENSMUST00000119136 465 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm15760-201ENSMUST00000119553 283 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm12825-201ENSMUST00000120249 563 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm15120-201ENSMUST00000120602 301 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm5287-201ENSMUST00000120666 598 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm11556-201ENSMUST00000120751 288 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.27□□□□□ -2.05
Sdc1P18828 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm25874-201ENSMUST00000178030 79 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm28688-201ENSMUST00000187301 268 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm29516-201ENSMUST00000190402 468 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm7871-201ENSMUST00000195346 618 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm43284-201ENSMUST00000200103 253 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm43026-201ENSMUST00000202972 325 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Sdc1P18828 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm7984-201ENSMUST00000060640 538 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc1P18828 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc1P18828 Gm25411-201ENSMUST00000083760 151 ntBASIC2.27□□□□□ -2.05
Sdc1P18828 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Sdc1P18828 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Sdc1P18828 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms