Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm6923-201ENSMUST00000118343 406 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm12513-201ENSMUST00000118617 352 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm13603-201ENSMUST00000119404 83 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm15190-201ENSMUST00000120855 276 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm11384-201ENSMUST00000121376 303 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm23867-201ENSMUST00000122649 274 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cdx1P18111 Gm16533-201ENSMUST00000140035 228 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm23559-201ENSMUST00000157824 103 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm24546-201ENSMUST00000158652 102 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx1P18111 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm24019-201ENSMUST00000178620 107 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm26243-201ENSMUST00000179260 107 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm27861-201ENSMUST00000183920 214 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm37692-201ENSMUST00000192633 232 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm18341-201ENSMUST00000197538 622 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm44295-201ENSMUST00000203805 437 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm44903-201ENSMUST00000206840 130 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm2446-201ENSMUST00000220144 772 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm7753-201ENSMUST00000221007 867 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm9370-201ENSMUST00000222787 609 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx1P18111 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx1P18111 Gm23296-201ENSMUST00000082555 107 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm23615-201ENSMUST00000082602 65 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Gm24859-201ENSMUST00000082729 107 ntBASIC2.37□□□□□ -2.03
Cdx1P18111 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx1P18111 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx1P18111 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm14647-201ENSMUST00000119392 680 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm15029-201ENSMUST00000119742 199 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm11556-201ENSMUST00000120751 288 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm12006-201ENSMUST00000120786 403 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm15986-201ENSMUST00000122153 400 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm25637-201ENSMUST00000157529 107 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm17538-201ENSMUST00000168236 327 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm17162-201ENSMUST00000168538 473 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm37684-201ENSMUST00000192779 355 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm44393-201ENSMUST00000197418 138 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm35570-201ENSMUST00000198730 681 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm43384-201ENSMUST00000200569 637 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm42665-201ENSMUST00000202100 586 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm45912-201ENSMUST00000210646 543 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx1P18111 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 Mir421-201ENSMUST00000083575 76 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.36□□□□□ -2.03
Cdx1P18111 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Cdx1P18111 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx1P18111 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cdx1P18111 Gm25539-201ENSMUST00000116886 122 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm15223-201ENSMUST00000120989 826 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm15466-201ENSMUST00000122299 333 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm14389-201ENSMUST00000140453 241 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.35□□□□□ -2.03
Cdx1P18111 Gm23599-201ENSMUST00000157261 251 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm23668-201ENSMUST00000157465 111 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm25373-201ENSMUST00000158156 115 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm43193-201ENSMUST00000197732 441 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm43899-201ENSMUST00000203675 246 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Gm45522-201ENSMUST00000210784 166 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.35□□□□□ -2.03
Cdx1P18111 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdx1P18111 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Cdx1P18111 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdx1P18111 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.35□□□□□ -2.03
Cdx1P18111 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdx1P18111 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdx1P18111 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cdx1P18111 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdx1P18111 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms