Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Msx1P13297 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Msx1P13297 Gm15497-201ENSMUST00000119137 551 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm12793-201ENSMUST00000119268 292 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm14861-201ENSMUST00000119451 455 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm12884-201ENSMUST00000120371 325 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm13992-201ENSMUST00000120558 156 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.93□□□□□ -1.62
Msx1P13297 Gm22725-201ENSMUST00000158092 110 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm22637-201ENSMUST00000158144 283 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Mir1947-201ENSMUST00000158235 85 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm23855-201ENSMUST00000158377 135 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm10087-201ENSMUST00000167650 330 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.93□□□□□ -1.62
Msx1P13297 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm37445-201ENSMUST00000195318 242 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm29704-201ENSMUST00000196011 253 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm43408-201ENSMUST00000198263 440 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.93□□□□□ -1.62
Msx1P13297 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Gm9512-201ENSMUST00000223112 497 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Gm24152-201ENSMUST00000082764 163 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Gm26495-201ENSMUST00000083152 137 ntBASIC4.93□□□□□ -1.62
Msx1P13297 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.93□□□□□ -1.62
Msx1P13297 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Msx1P13297 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Msx1P13297 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Msx1P13297 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Msx1P13297 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Msx1P13297 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.92□□□□□ -1.62
Msx1P13297 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.92□□□□□ -1.62
Msx1P13297 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Msx1P13297 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Gm26293-201ENSMUST00000104170 84 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm24235-201ENSMUST00000104319 129 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm13491-201ENSMUST00000118267 235 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm12328-201ENSMUST00000118611 197 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm16404-201ENSMUST00000177739 468 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm6660-201ENSMUST00000179149 468 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm14598-201ENSMUST00000180109 468 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm14625-201ENSMUST00000180231 468 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm29603-201ENSMUST00000186792 334 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm6003-201ENSMUST00000187903 463 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Ighv15-1-201ENSMUST00000194450 276 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Msx1P13297 Gm45539-201ENSMUST00000210313 428 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Msx1P13297 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm25139-201ENSMUST00000083247 210 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm23972-201ENSMUST00000083322 165 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Gm22350-201ENSMUST00000083924 156 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Msx1P13297 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Msx1P13297 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Msx1P13297 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.92□□□□□ -1.62
Msx1P13297 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Msx1P13297 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Msx1P13297 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Msx1P13297 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Msx1P13297 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Msx1P13297 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Msx1P13297 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.91□□□□□ -1.62
Msx1P13297 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm22349-201ENSMUST00000157864 107 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm25020-201ENSMUST00000178071 107 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Msx1P13297 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.91□□□□□ -1.62
Msx1P13297 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm43746-201ENSMUST00000200028 317 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm8719-201ENSMUST00000203602 534 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm44594-201ENSMUST00000208982 407 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm25930-201ENSMUST00000082785 107 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Gm25896-201ENSMUST00000083713 136 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Msx1P13297 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Smc5-206ENSMUST00000226111 3265 ntBASIC4.91□□□□□ -1.62
Msx1P13297 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Msx1P13297 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Msx1P13297 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms